Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.51□□□□□ -1.37
VARSP26640 AC090651.1-201ENST00000567865 634 ntBASIC6.51□□□□□ -1.37
VARSP26640 MIR3910-1-201ENST00000580936 111 ntBASIC6.51□□□□□ -1.37
VARSP26640 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.51□□□□□ -1.37
VARSP26640 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VARSP26640 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 AL031320.1-201ENST00000604177 357 ntBASIC6.51□□□□□ -1.37
VARSP26640 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.51□□□□□ -1.37
VARSP26640 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.51□□□□□ -1.37
VARSP26640 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARSP26640 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.51□□□□□ -1.37
VARSP26640 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.51□□□□□ -1.37
VARSP26640 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
VARSP26640 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VARSP26640 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 AC007342.5-201ENST00000571340 2142 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC068769.1-201ENST00000474767 2426 ntBASIC6.5□□□□□ -1.37
VARSP26640 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.5□□□□□ -1.37
VARSP26640 SOCS5P3-201ENST00000425115 1576 ntBASIC6.5□□□□□ -1.37
VARSP26640 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.5□□□□□ -1.37
VARSP26640 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 Y_RNA.14-201ENST00000362415 103 ntBASIC6.5□□□□□ -1.37
VARSP26640 Y_RNA.106-201ENST00000363189 100 ntBASIC6.5□□□□□ -1.37
VARSP26640 RNU6-97P-201ENST00000363387 104 ntBASIC6.5□□□□□ -1.37
VARSP26640 RNA5SP152-201ENST00000365184 110 ntBASIC6.5□□□□□ -1.37
VARSP26640 RNU1-55P-201ENST00000365510 158 ntBASIC6.5□□□□□ -1.37
VARSP26640 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.5□□□□□ -1.37
VARSP26640 Y_RNA.555-201ENST00000384673 110 ntBASIC6.5□□□□□ -1.37
VARSP26640 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.5□□□□□ -1.37
VARSP26640 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 AL451136.1-201ENST00000435399 325 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC108734.1-201ENST00000439549 399 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC079922.1-201ENST00000443291 359 ntBASIC6.5□□□□□ -1.37
VARSP26640 PFN1P11-201ENST00000445829 389 ntBASIC6.5□□□□□ -1.37
VARSP26640 RPL7P51-201ENST00000490532 749 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.5□□□□□ -1.37
VARSP26640 AC108471.1-201ENST00000513977 287 ntBASIC6.5□□□□□ -1.37
VARSP26640 RNU4-77P-201ENST00000516692 156 ntBASIC6.5□□□□□ -1.37
VARSP26640 RNU1-54P-201ENST00000517181 120 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.5□□□□□ -1.37
VARSP26640 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.5□□□□□ -1.37
VARSP26640 HMGB1P42-201ENST00000532126 553 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.5□□□□□ -1.37
VARSP26640 LSM6P2-201ENST00000552208 177 ntBASIC6.5□□□□□ -1.37
VARSP26640 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.5□□□□□ -1.37
VARSP26640 MIR4420-201ENST00000583944 77 ntBASIC6.5□□□□□ -1.37
VARSP26640 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.5□□□□□ -1.37
VARSP26640 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.5□□□□□ -1.37
VARSP26640 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.5□□□□□ -1.37
VARSP26640 AL713866.2-201ENST00000603579 219 ntBASIC6.5□□□□□ -1.37
VARSP26640 SNORD58B-201ENST00000607313 66 ntBASIC6.5□□□□□ -1.37
VARSP26640 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.5□□□□□ -1.37
VARSP26640 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 AC103858.2-201ENST00000621471 543 ntBASIC6.5□□□□□ -1.37
VARSP26640 MIR6503-201ENST00000622884 86 ntBASIC6.5□□□□□ -1.37
VARSP26640 AP000843.1-201ENST00000624880 701 ntBASIC6.5□□□□□ -1.37
VARSP26640 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.5□□□□□ -1.37
VARSP26640 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
VARSP26640 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 AC022031.1-201ENST00000585985 2593 ntBASIC6.5□□□□□ -1.37
VARSP26640 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARSP26640 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
VARSP26640 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
VARSP26640 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.49□□□□□ -1.37
VARSP26640 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARSP26640 Y_RNA.222-201ENST00000364264 102 ntBASIC6.49□□□□□ -1.37
VARSP26640 RNU6-200P-201ENST00000364743 107 ntBASIC6.49□□□□□ -1.37
VARSP26640 RN7SKP130-201ENST00000364924 301 ntBASIC6.49□□□□□ -1.37
VARSP26640 RNU6-441P-201ENST00000384545 106 ntBASIC6.49□□□□□ -1.37
VARSP26640 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VARSP26640 RNA5SP474-201ENST00000391234 90 ntBASIC6.49□□□□□ -1.37
VARSP26640 RPL21P1-201ENST00000399532 476 ntBASIC6.49□□□□□ -1.37
VARSP26640 RPL31P45-201ENST00000419532 356 ntBASIC6.49□□□□□ -1.37
VARSP26640 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
VARSP26640 AHCYP8-201ENST00000425108 209 ntBASIC6.49□□□□□ -1.37
VARSP26640 RPS17P8-201ENST00000434525 335 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms