Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.32□□□□□ -1.56
TOP2AP11388 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.32□□□□□ -1.56
TOP2AP11388 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP2AP11388 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.32□□□□□ -1.56
TOP2AP11388 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOP2AP11388 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
TOP2AP11388 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TOP2AP11388 MTCO1P8-201ENST00000416914 1523 ntBASIC5.31□□□□□ -1.56
TOP2AP11388 SRP72P2-201ENST00000344851 1979 ntBASIC5.31□□□□□ -1.56
TOP2AP11388 AL136360.1-201ENST00000503377 1900 ntBASIC5.31□□□□□ -1.56
TOP2AP11388 RN7SKP56-201ENST00000410513 331 ntBASIC5.31□□□□□ -1.56
TOP2AP11388 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.31□□□□□ -1.56
TOP2AP11388 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.31□□□□□ -1.56
TOP2AP11388 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TOP2AP11388 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TOP2AP11388 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TOP2AP11388 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TOP2AP11388 AC020633.1-201ENST00000468439 2247 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 AL359693.1-201ENST00000614959 2407 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 SNORA9.2-201ENST00000365361 133 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TOP2AP11388 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.3□□□□□ -1.56
TOP2AP11388 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.3□□□□□ -1.56
TOP2AP11388 AL136097.1-201ENST00000456945 913 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.3□□□□□ -1.56
TOP2AP11388 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.3□□□□□ -1.56
TOP2AP11388 RFPL4AP5-201ENST00000514977 504 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.3□□□□□ -1.56
TOP2AP11388 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TOP2AP11388 AC015871.2-201ENST00000603605 948 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 AC007619.2-201ENST00000605743 379 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.3□□□□□ -1.56
TOP2AP11388 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TOP2AP11388 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TOP2AP11388 THAP12P8-201ENST00000447914 2115 ntBASIC5.3□□□□□ -1.56
TOP2AP11388 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TOP2AP11388 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TOP2AP11388 AL031679.1-201ENST00000400616 525 ntBASIC5.29□□□□□ -1.56
TOP2AP11388 RPS4XP8-201ENST00000402039 771 ntBASIC5.29□□□□□ -1.56
TOP2AP11388 RN7SKP284-201ENST00000411002 343 ntBASIC5.29□□□□□ -1.56
TOP2AP11388 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.29□□□□□ -1.56
TOP2AP11388 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.29□□□□□ -1.56
TOP2AP11388 ISCA1P2-201ENST00000438679 421 ntBASIC5.29□□□□□ -1.56
TOP2AP11388 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.29□□□□□ -1.56
TOP2AP11388 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TOP2AP11388 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.29□□□□□ -1.56
TOP2AP11388 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.29□□□□□ -1.56
TOP2AP11388 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TOP2AP11388 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.29□□□□□ -1.56
TOP2AP11388 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TOP2AP11388 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TOP2AP11388 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TOP2AP11388 AC097634.1-201ENST00000604491 2467 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TOP2AP11388 AL139095.1-201ENST00000404326 391 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.28□□□□□ -1.56
TOP2AP11388 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.28□□□□□ -1.56
TOP2AP11388 RPS27AP1-201ENST00000475545 471 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 RPL12P22-201ENST00000519073 490 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AL390334.1-201ENST00000556395 450 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.28□□□□□ -1.56
TOP2AP11388 HMGB1P6-201ENST00000569046 646 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 ELOCP29-201ENST00000588193 334 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.28□□□□□ -1.56
TOP2AP11388 AC231759.1-201ENST00000616455 597 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AC073476.4-201ENST00000628409 72 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TOP2AP11388 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TOP2AP11388 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TOP2AP11388 AC107027.3-201ENST00000565095 3473 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AL603766.1-201ENST00000407763 664 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.28□□□□□ -1.56
TOP2AP11388 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.28□□□□□ -1.56
TOP2AP11388 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.28□□□□□ -1.56
TOP2AP11388 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.28□□□□□ -1.56
TOP2AP11388 AC034159.1-201ENST00000513885 583 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 RNU4ATAC3P-201ENST00000516699 126 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 OR5G4P-201ENST00000525251 760 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AP001636.2-201ENST00000525517 696 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.28□□□□□ -1.56
TOP2AP11388 AC091903.1-201ENST00000624322 454 ntBASIC5.28□□□□□ -1.56
TOP2AP11388 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC5.28□□□□□ -1.56
TOP2AP11388 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TOP2AP11388 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
TOP2AP11388 RPL7P59-201ENST00000447700 943 ntBASIC5.27□□□□□ -1.57
TOP2AP11388 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TOP2AP11388 NRBF2P5-201ENST00000603087 788 ntBASIC5.27□□□□□ -1.57
TOP2AP11388 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TOP2AP11388 MAPK10-373ENST00000641983 6772 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TOP2AP11388 RNU4-82P-201ENST00000362443 140 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 AC019097.1-201ENST00000424783 735 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 AC073069.1-201ENST00000428657 441 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 RN7SL20P-201ENST00000488827 297 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 AP001207.2-201ENST00000519490 539 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TOP2AP11388 TGIF1P1-201ENST00000558095 802 ntBASIC5.26□□□□□ -1.57
TOP2AP11388 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.26□□□□□ -1.57
TOP2AP11388 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.26□□□□□ -1.57
TOP2AP11388 AC233280.2-201ENST00000603917 1070 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms