Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.11□□□□□ -1.43
RARAP10276 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.11□□□□□ -1.43
RARAP10276 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.11□□□□□ -1.43
RARAP10276 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RARAP10276 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.11□□□□□ -1.43
RARAP10276 VN1R84P-201ENST00000593697 235 ntBASIC6.11□□□□□ -1.43
RARAP10276 AL136131.3-201ENST00000607600 188 ntBASIC6.11□□□□□ -1.43
RARAP10276 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.11□□□□□ -1.43
RARAP10276 AL591926.1-201ENST00000620542 217 ntBASIC6.11□□□□□ -1.43
RARAP10276 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 AC079597.1-201ENST00000624306 508 ntBASIC6.11□□□□□ -1.43
RARAP10276 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.11□□□□□ -1.43
RARAP10276 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RARAP10276 AC079776.5-201ENST00000641920 211 ntBASIC6.11□□□□□ -1.43
RARAP10276 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RARAP10276 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 AC012618.3-205ENST00000637896 1496 ntBASIC6.1□□□□□ -1.43
RARAP10276 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RARAP10276 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RARAP10276 PARP4P2-201ENST00000446672 3326 ntBASIC6.1□□□□□ -1.43
RARAP10276 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 COX6B1P3-201ENST00000312310 260 ntBASIC6.1□□□□□ -1.43
RARAP10276 Y_RNA.100-201ENST00000363141 102 ntBASIC6.1□□□□□ -1.43
RARAP10276 RNU1-65P-201ENST00000363919 148 ntBASIC6.1□□□□□ -1.43
RARAP10276 RNU4-20P-201ENST00000365601 151 ntBASIC6.1□□□□□ -1.43
RARAP10276 Y_RNA.401-201ENST00000383965 117 ntBASIC6.1□□□□□ -1.43
RARAP10276 MT-TR-201ENST00000387439 65 ntBASIC6.1□□□□□ -1.43
RARAP10276 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RARAP10276 RNA5SP91-201ENST00000390902 119 ntBASIC6.1□□□□□ -1.43
RARAP10276 RPL7P60-201ENST00000397636 735 ntBASIC6.1□□□□□ -1.43
RARAP10276 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.1□□□□□ -1.43
RARAP10276 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 RNU6-193P-201ENST00000410977 107 ntBASIC6.1□□□□□ -1.43
RARAP10276 RPS15AP12-201ENST00000419498 388 ntBASIC6.1□□□□□ -1.43
RARAP10276 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.1□□□□□ -1.43
RARAP10276 AC007679.3-201ENST00000434035 414 ntBASIC6.1□□□□□ -1.43
RARAP10276 NPM1P18-201ENST00000434232 732 ntBASIC6.1□□□□□ -1.43
RARAP10276 PPIAP27-201ENST00000453800 265 ntBASIC6.1□□□□□ -1.43
RARAP10276 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 HMGB1P4-201ENST00000455362 567 ntBASIC6.1□□□□□ -1.43
RARAP10276 AC004129.2-201ENST00000457229 287 ntBASIC6.1□□□□□ -1.43
RARAP10276 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.1□□□□□ -1.43
RARAP10276 VN1R17P-201ENST00000472048 1090 ntBASIC6.1□□□□□ -1.43
RARAP10276 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.1□□□□□ -1.43
RARAP10276 AC012181.1-201ENST00000479895 423 ntBASIC6.1□□□□□ -1.43
RARAP10276 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.1□□□□□ -1.43
RARAP10276 RNU4-29P-201ENST00000515943 174 ntBASIC6.1□□□□□ -1.43
RARAP10276 Y_RNA.665-201ENST00000516177 98 ntBASIC6.1□□□□□ -1.43
RARAP10276 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 AL163153.1-201ENST00000554223 283 ntBASIC6.1□□□□□ -1.43
RARAP10276 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.1□□□□□ -1.43
RARAP10276 AC008507.3-201ENST00000585753 472 ntBASIC6.1□□□□□ -1.43
RARAP10276 AL353997.4-201ENST00000586196 166 ntBASIC6.1□□□□□ -1.43
RARAP10276 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 7SK.7-201ENST00000603504 247 ntBASIC6.1□□□□□ -1.43
RARAP10276 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 AC245014.3-201ENST00000618589 347 ntBASIC6.1□□□□□ -1.43
RARAP10276 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.1□□□□□ -1.43
RARAP10276 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RARAP10276 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.1□□□□□ -1.43
RARAP10276 AP005435.3-201ENST00000531260 3198 ntBASIC6.1□□□□□ -1.43
RARAP10276 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.1□□□□□ -1.43
RARAP10276 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.09□□□□□ -1.43
RARAP10276 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RARAP10276 MFSD8-219ENST00000641228 2559 ntBASIC6.09□□□□□ -1.43
RARAP10276 RNA5SP394-201ENST00000364216 119 ntBASIC6.09□□□□□ -1.43
RARAP10276 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RARAP10276 RNU6-225P-201ENST00000384613 103 ntBASIC6.09□□□□□ -1.43
RARAP10276 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RARAP10276 SNORD37.1-201ENST00000390968 65 ntBASIC6.09□□□□□ -1.43
RARAP10276 AC016739.1-201ENST00000405359 345 ntBASIC6.09□□□□□ -1.43
RARAP10276 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms