Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC039056.2-201ENST00000622261 511 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC026422.1-201ENST00000623961 452 ntBASIC4.58□□□□□ -1.68
MMP3P08254 OR5BE1P-202ENST00000641168 1176 ntBASIC4.58□□□□□ -1.68
MMP3P08254 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.58□□□□□ -1.68
MMP3P08254 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
MMP3P08254 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.57□□□□□ -1.68
MMP3P08254 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MMP3P08254 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MMP3P08254 SNORA60-201ENST00000362396 134 ntBASIC4.57□□□□□ -1.68
MMP3P08254 SNORA70.4-201ENST00000365509 134 ntBASIC4.57□□□□□ -1.68
MMP3P08254 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
MMP3P08254 AL512430.2-201ENST00000406786 339 ntBASIC4.57□□□□□ -1.68
MMP3P08254 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 AC009518.2-201ENST00000418056 731 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 AC011233.1-201ENST00000422812 283 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 AL009174.1-201ENST00000426577 416 ntBASIC4.57□□□□□ -1.68
MMP3P08254 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.57□□□□□ -1.68
MMP3P08254 TBCAP1-201ENST00000436520 327 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AL031663.1-201ENST00000437445 219 ntBASIC4.57□□□□□ -1.68
MMP3P08254 RPS7P5-201ENST00000441482 581 ntBASIC4.57□□□□□ -1.68
MMP3P08254 HMGB3P9-201ENST00000441799 583 ntBASIC4.57□□□□□ -1.68
MMP3P08254 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 HMGB1P16-201ENST00000447155 540 ntBASIC4.57□□□□□ -1.68
MMP3P08254 Z99714.1-201ENST00000450463 807 ntBASIC4.57□□□□□ -1.68
MMP3P08254 BX248409.1-201ENST00000455497 255 ntBASIC4.57□□□□□ -1.68
MMP3P08254 GAPDHP36-201ENST00000480688 918 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC012158.1-204ENST00000483430 465 ntBASIC4.57□□□□□ -1.68
MMP3P08254 RPS4XP15-201ENST00000489210 795 ntBASIC4.57□□□□□ -1.68
MMP3P08254 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 KRT19P6-201ENST00000510983 209 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC008837.2-201ENST00000513076 418 ntBASIC4.57□□□□□ -1.68
MMP3P08254 RNU6-347P-201ENST00000516658 105 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 IGKV2-36-201ENST00000519999 223 ntBASIC4.57□□□□□ -1.68
MMP3P08254 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 AC087373.1-201ENST00000524920 491 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AP000926.4-201ENST00000527351 454 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 OR4C2P-201ENST00000530855 1064 ntBASIC4.57□□□□□ -1.68
MMP3P08254 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.57□□□□□ -1.68
MMP3P08254 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.57□□□□□ -1.68
MMP3P08254 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.57□□□□□ -1.68
MMP3P08254 MTCYBP27-201ENST00000555160 670 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 AC022662.1-201ENST00000580252 331 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC008759.1-201ENST00000589783 983 ntBASIC4.57□□□□□ -1.68
MMP3P08254 VN1R88P-201ENST00000596787 292 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AL592436.1-201ENST00000605135 558 ntBASIC4.57□□□□□ -1.68
MMP3P08254 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.57□□□□□ -1.68
MMP3P08254 MIR6868-201ENST00000611215 58 ntBASIC4.57□□□□□ -1.68
MMP3P08254 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MMP3P08254 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.57□□□□□ -1.68
MMP3P08254 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MMP3P08254 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MMP3P08254 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MMP3P08254 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
MMP3P08254 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 Z95327.2-201ENST00000414579 1873 ntBASIC4.56□□□□□ -1.68
MMP3P08254 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 ERCC6-202ENST00000374127 1782 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.56□□□□□ -1.68
MMP3P08254 SNORD113-6-201ENST00000363345 75 ntBASIC4.56□□□□□ -1.68
MMP3P08254 Y_RNA.465-201ENST00000384293 102 ntBASIC4.56□□□□□ -1.68
MMP3P08254 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MMP3P08254 RAP1BP1-201ENST00000412709 553 ntBASIC4.56□□□□□ -1.68
MMP3P08254 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 GTF2IP23-201ENST00000423746 351 ntBASIC4.56□□□□□ -1.68
MMP3P08254 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MMP3P08254 DYNLL1P7-201ENST00000429273 258 ntBASIC4.56□□□□□ -1.68
MMP3P08254 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.56□□□□□ -1.68
MMP3P08254 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 AC092809.1-201ENST00000441469 474 ntBASIC4.56□□□□□ -1.68
MMP3P08254 COX6CP18-201ENST00000448769 222 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC104978.1-201ENST00000449387 391 ntBASIC4.56□□□□□ -1.68
MMP3P08254 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.56□□□□□ -1.68
MMP3P08254 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.56□□□□□ -1.68
MMP3P08254 RPL36AP13-201ENST00000457490 317 ntBASIC4.56□□□□□ -1.68
MMP3P08254 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.56□□□□□ -1.68
MMP3P08254 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.56□□□□□ -1.68
MMP3P08254 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.56□□□□□ -1.68
MMP3P08254 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms