Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 SMG1P7-201ENST00000565246 2704 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 MRE11P1-201ENST00000464884 2127 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RNU6-777P-201ENST00000364265 104 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RNU6-769P-201ENST00000384407 104 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RNU6-692P-201ENST00000384496 107 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL049693.1-201ENST00000402760 611 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RNA5SP296-201ENST00000410523 111 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RNU6-195P-201ENST00000411352 109 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RPSAP35-201ENST00000413753 818 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 SPA17P1-201ENST00000416656 452 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 BMS1P17-202ENST00000416720 316 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC006335.2-201ENST00000437993 330 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 SNRPEP7-201ENST00000438350 220 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC099563.1-201ENST00000456086 418 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC021660.1-201ENST00000465006 554 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL133445.1-201ENST00000467051 452 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RN7SL583P-201ENST00000475692 287 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RN7SL184P-201ENST00000488308 297 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC108693.1-201ENST00000496068 432 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 HMGN1P9-201ENST00000515212 298 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 RNU6-615P-201ENST00000516065 106 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 IGKV2-36-201ENST00000519999 223 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC022360.1-201ENST00000521058 340 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AF279873.1-201ENST00000523393 313 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ARL2BPP2-201ENST00000550907 489 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC125611.2-201ENST00000551907 647 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL358913.1-201ENST00000554342 121 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL391646.1-201ENST00000603860 190 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC087283.1-201ENST00000604029 1074 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 SUMO2P15-201ENST00000604285 278 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL359999.1-201ENST00000604513 294 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 BNIP3P10-201ENST00000605360 577 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC011816.2-201ENST00000607089 556 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC135507.2-201ENST00000612443 309 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC025574.2-201ENST00000615621 514 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AC091905.1-201ENST00000624400 311 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 TRIM51GP-201ENST00000534741 1350 ntBASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXP3Q9BZS1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 SRRM1P3-201ENST00000426911 2678 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AL031595.2-201ENST00000624215 19071 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RNU1-19P-201ENST00000363306 165 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RN7SKP124-201ENST00000364730 341 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms