Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL136964.1-201ENST00000622038 2990 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 Y_RNA.62-201ENST00000362840 99 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 MT-TP-201ENST00000387461 68 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL034403.1-201ENST00000399414 885 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 SMC4P1-201ENST00000414479 527 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 TRGV6-201ENST00000417928 299 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 PTP4A1P5-201ENST00000420305 455 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL357552.1-201ENST00000445254 415 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 RN7SL601P-201ENST00000471221 293 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AC104619.4-201ENST00000510773 249 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 ARL2BPP6-201ENST00000512757 439 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AC011602.1-201ENST00000546484 331 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 PSMA6P4-201ENST00000603247 718 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL365503.1-201ENST00000605247 905 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL592295.2-201ENST00000612578 206 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AC243654.2-201ENST00000612843 443 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 TNPO1P3-201ENST00000436471 2662 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AL513302.2-201ENST00000562313 1842 ntBASIC4.14□□□□□ -1.75
UPF3BQ9BZI7 AC004944.1-201ENST00000517807 3059 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC245052.5-201ENST00000416320 649 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 U3.44-201ENST00000458938 192 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AL136126.1-201ENST00000473603 402 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC020893.1-201ENST00000502452 580 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 RPL23AP94-201ENST00000512518 302 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC087888.1-201ENST00000550884 1254 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC106785.3-201ENST00000564064 847 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 MIR4512-201ENST00000583257 77 ntBASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPF3BQ9BZI7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 BX510359.1-201ENST00000456973 237 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 RPS4XP2-201ENST00000458402 793 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AC018635.1-201ENST00000468292 1030 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AL049873.1-201ENST00000480540 376 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AP000926.4-201ENST00000527351 454 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms