Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC021755.1-201ENST00000559747 1447 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01109-201ENST00000603837 3081 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 UBBP2-201ENST00000376781 231 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 MIR921-201ENST00000401133 56 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC008280.1-201ENST00000418851 412 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AL049745.1-201ENST00000433953 286 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 THAP5P1-201ENST00000439089 262 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 SCARNA10-201ENST00000459255 330 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC092045.1-201ENST00000495716 1231 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 HMGB1P28-201ENST00000507778 552 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC007016.1-201ENST00000512110 244 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AL161713.1-201ENST00000555538 145 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AL512347.1-201ENST00000566420 503 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC067852.4-201ENST00000590314 478 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 HMGB2P1-201ENST00000591146 634 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 MIR6730-201ENST00000622213 67 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AP000843.1-201ENST00000624880 701 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC120349.2-201ENST00000625002 298 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 FP325313.1-201ENST00000638228 703 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 Z73965.1-201ENST00000623412 2297 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 MTND4P34-201ENST00000572715 1371 ntBASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDK5RAP3Q96JB5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.58
CDK5RAP3Q96JB5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CDK5RAP3Q96JB5 AC087190.4-201ENST00000574616 8334 ntBASIC5.15□□□□□ -1.58
CDK5RAP3Q96JB5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK5RAP3Q96JB5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK5RAP3Q96JB5 RNU6-251P-201ENST00000363235 104 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 ATP5F1P4-201ENST00000397288 746 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 MIR1284-201ENST00000408337 120 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC062016.2-201ENST00000420950 676 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC019178.2-201ENST00000423595 505 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 RPS12P10-201ENST00000427031 377 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 USP9YP9-201ENST00000429406 715 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 MTND1P29-201ENST00000448112 647 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 RPL23AP35-201ENST00000451906 501 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 HMGN3P1-201ENST00000453847 193 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 RPL12P20-201ENST00000475538 479 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC013828.1-201ENST00000481845 158 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC005178.1-201ENST00000508392 440 ntBASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.15□□□□□ -1.59
CDK5RAP3Q96JB5 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms