Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC025857.2-201ENST00000602711 238 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 MZT1P2-201ENST00000604387 248 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 MIR7155-201ENST00000615925 56 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 TPTE2P4-201ENST00000258589 1605 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 SALL4P7-201ENST00000555779 3120 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC008669.1-201ENST00000565823 2178 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 DDX18P3-201ENST00000404856 2007 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-28P-201ENST00000362378 107 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-1287P-201ENST00000362914 107 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 Y_RNA.200-201ENST00000364018 102 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-171P-201ENST00000384354 107 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-1060P-201ENST00000384664 107 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-95P-201ENST00000384697 107 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU2-20P-201ENST00000410425 191 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU4-46P-201ENST00000410818 138 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 AL139156.1-201ENST00000412785 841 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 MRPS18BP2-201ENST00000434310 759 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 FTH1P1-201ENST00000437933 532 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 RPS15AP27-201ENST00000449183 343 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC245028.2-201ENST00000458673 253 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 FTH1P8-201ENST00000498161 514 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 PGAM1P13-201ENST00000507497 754 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-1332P-201ENST00000516666 104 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RNU6-897P-201ENST00000517135 105 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 IGKV2-36-201ENST00000519999 223 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC022884.3-201ENST00000579571 248 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 FAM27E4-201ENST00000605259 342 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC073657.2-201ENST00000605661 303 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC025034.2-201ENST00000623264 286 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC011460.1-201ENST00000636268 1834 ntBASIC7.03□□□□□ -1.28
LRCH3Q96II8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LRCH3Q96II8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
LRCH3Q96II8 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.02□□□□□ -1.28
LRCH3Q96II8 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
LRCH3Q96II8 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
LRCH3Q96II8 AC108751.5-201ENST00000492880 1336 ntBASIC7.02□□□□□ -1.28
LRCH3Q96II8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
LRCH3Q96II8 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.02□□□□□ -1.29
LRCH3Q96II8 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LRCH3Q96II8 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms