Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 RNA5SP512-201ENST00000364550 120 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AL136372.1-201ENST00000403060 228 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 RNU4-78P-201ENST00000410940 126 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 RNA5SP107-201ENST00000411358 122 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 MRPS21P5-201ENST00000417885 231 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 MTCYBP8-201ENST00000422855 651 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AL591623.2-201ENST00000449978 222 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC094085.1-201ENST00000468914 584 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC126389.1-201ENST00000477436 290 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC018645.1-201ENST00000505003 109 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 HSD3BP3-201ENST00000514706 994 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 FAM60DP-201ENST00000524174 632 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC005224.3-201ENST00000584683 2140 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AP001029.3-201ENST00000588063 596 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC004805.3-201ENST00000603178 310 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC010680.3-201ENST00000604215 520 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC114477.1-201ENST00000605097 605 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 TUG1_1.1-201ENST00000610654 145 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC130324.3-201ENST00000614165 542 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 uc_338.31-201ENST00000615595 186 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AC010133.1-201ENST00000615809 842 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 AL603758.1-201ENST00000618654 241 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 OR4G1P-203ENST00000641984 1631 ntBASIC6.45□□□□□ -1.38
CCDC97Q96F63 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC97Q96F63 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC97Q96F63 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 MIR153-1-201ENST00000384914 90 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 SNORD37.1-201ENST00000390968 65 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 RNU2-39P-201ENST00000410604 198 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 MTND1P14-201ENST00000427400 950 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 CKS1BP5-201ENST00000434172 273 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 MRPS18BP2-201ENST00000434310 759 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC005094.1-201ENST00000440420 368 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC007967.1-201ENST00000455422 1159 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC007537.2-201ENST00000472093 511 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 NENFP3-201ENST00000503735 313 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC116562.3-201ENST00000506136 177 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC026427.2-201ENST00000506228 536 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC111000.3-201ENST00000508057 576 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 DEFB108D-201ENST00000527787 222 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC068587.5-201ENST00000528506 175 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 LSM3P2-201ENST00000551246 273 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC090651.1-201ENST00000567865 634 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC093838.1-201ENST00000613014 469 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 AC112487.2-201ENST00000637950 304 ntBASIC6.44□□□□□ -1.38
CCDC97Q96F63 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC97Q96F63 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC97Q96F63 MAPK10-304ENST00000641341 3984 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 FAM91A3P-201ENST00000456826 2544 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms