Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 RPL35AP21-201ENST00000437667 333 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 RPL22P17-201ENST00000438729 315 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 FAM103A2P-201ENST00000444122 354 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 HMGN1P36-201ENST00000446623 298 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.68□□□□□ -1.5
UBXN4Q92575 SSXP1-201ENST00000453640 473 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 SBDSP1-204ENST00000453858 737 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 CFTRP1-201ENST00000456646 183 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.68□□□□□ -1.5
UBXN4Q92575 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.68□□□□□ -1.5
UBXN4Q92575 AC106872.4-201ENST00000510050 523 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 FABP5P5-201ENST00000515537 406 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 AC105031.1-201ENST00000518550 476 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 IGHV3-32-201ENST00000519182 355 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 RFPL1S-203ENST00000539579 330 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.68□□□□□ -1.5
UBXN4Q92575 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.68□□□□□ -1.5
UBXN4Q92575 AC008759.1-201ENST00000589783 983 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.68□□□□□ -1.5
UBXN4Q92575 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.68□□□□□ -1.5
UBXN4Q92575 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
UBXN4Q92575 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBXN4Q92575 LINC01355-201ENST00000566551 5444 ntBASIC5.68□□□□□ -1.5
UBXN4Q92575 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBXN4Q92575 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBXN4Q92575 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 RARSP1-201ENST00000542842 1418 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBXN4Q92575 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 RN7SKP153-201ENST00000365026 316 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.67□□□□□ -1.5
UBXN4Q92575 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 RPL21P32-201ENST00000419877 477 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.67□□□□□ -1.5
UBXN4Q92575 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 RPL34P3-201ENST00000421454 338 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.67□□□□□ -1.5
UBXN4Q92575 EZH2P1-201ENST00000431167 291 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 AL590365.1-201ENST00000450788 243 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AL162388.1-201ENST00000450912 352 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 TPTE2P5-203ENST00000458118 728 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 RN7SL174P-201ENST00000475578 289 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AC009120.1-201ENST00000493458 473 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 RN7SL447P-201ENST00000494711 245 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 RN7SL101P-201ENST00000496350 279 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AC112204.1-201ENST00000502591 103 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 NENFP3-201ENST00000503735 313 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.67□□□□□ -1.5
UBXN4Q92575 RN7SKP46-201ENST00000515942 234 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 CYCSP22-201ENST00000517555 339 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 DEFB109D-201ENST00000529497 240 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.67□□□□□ -1.5
UBXN4Q92575 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.67□□□□□ -1.5
UBXN4Q92575 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 AL590099.1-201ENST00000615276 138 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 AP003400.3-201ENST00000624904 346 ntBASIC5.67□□□□□ -1.5
UBXN4Q92575 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBXN4Q92575 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.67□□□□□ -1.5
UBXN4Q92575 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.67□□□□□ -1.5
UBXN4Q92575 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UBXN4Q92575 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UBXN4Q92575 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
UBXN4Q92575 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBXN4Q92575 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBXN4Q92575 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBXN4Q92575 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBXN4Q92575 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBXN4Q92575 RNA5SP500-201ENST00000364486 119 ntBASIC5.66□□□□□ -1.5
UBXN4Q92575 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBXN4Q92575 RN7SKP56-201ENST00000410513 331 ntBASIC5.66□□□□□ -1.5
UBXN4Q92575 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.66□□□□□ -1.5
UBXN4Q92575 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.66□□□□□ -1.5
UBXN4Q92575 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.66□□□□□ -1.5
UBXN4Q92575 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.66□□□□□ -1.5
UBXN4Q92575 AC006366.1-201ENST00000422002 759 ntBASIC5.66□□□□□ -1.5
UBXN4Q92575 AL356583.2-201ENST00000426536 280 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms