Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RN7SKP156-201ENST00000410308 342 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 HMGB3P5-201ENST00000428894 612 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC005002.1-201ENST00000447458 540 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 OR51B8P-201ENST00000449892 769 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 MRPL35P4-201ENST00000453682 566 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RPS20P21-201ENST00000466859 343 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC084198.1-201ENST00000477747 402 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RPL30P11-201ENST00000495304 339 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RAC1P2-201ENST00000511164 579 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 MTND4LP31-201ENST00000514859 294 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 PRELID3BP4-201ENST00000515476 571 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC068446.3-201ENST00000555285 382 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AP000919.1-202ENST00000581139 1264 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 BNIP3P4-201ENST00000604946 565 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC124016.2-201ENST00000610058 665 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
C9orf40Q8IXQ3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC022893.2-201ENST00000564832 3296 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 MIR423-201ENST00000362201 94 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 RNU5B-1-201ENST00000363286 116 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 RN7SKP159-201ENST00000410657 292 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 RPL36AP36-201ENST00000418616 301 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 USP12PY-201ENST00000427677 1064 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 OR4F13P-201ENST00000428478 931 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL445584.1-201ENST00000431451 330 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC122718.1-201ENST00000439448 744 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL356535.1-201ENST00000440335 398 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL359073.1-201ENST00000448036 403 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 FAM133DP-201ENST00000464802 691 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC073522.1-201ENST00000483312 377 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC023050.1-201ENST00000498198 304 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC093801.2-201ENST00000503966 1050 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 RNA5SP208-201ENST00000516156 78 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 OR4A2P-201ENST00000527276 913 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC135001.1-201ENST00000544546 283 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC084757.1-201ENST00000559987 490 ntBASIC3.53□□□□□ -1.84
C9orf40Q8IXQ3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms