Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SCARNA22-201ENST00000503991 125 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 RNU1-6P-201ENST00000516290 144 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 DUXAP1-201ENST00000556632 463 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC012557.2-201ENST00000605919 418 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 MIR7641-1-201ENST00000627518 61 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC018529.3-201ENST00000624212 2254 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 LINC01355-201ENST00000566551 5444 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RNU6-560P-201ENST00000364007 108 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 MIR298-201ENST00000401212 88 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RN7SKP182-201ENST00000410772 298 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 DBF4P1-201ENST00000412976 1892 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 ZNF885P-201ENST00000420174 1098 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC009237.2-201ENST00000421358 284 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC068287.1-201ENST00000430283 295 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC079776.3-201ENST00000450665 370 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 SNRPGP5-201ENST00000456003 220 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RNU7-125P-201ENST00000458760 62 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC010326.1-201ENST00000462726 602 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RN7SL481P-201ENST00000477764 299 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 CEACAMP10-202ENST00000495431 496 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC111000.3-201ENST00000508057 576 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 OR5BM1P-201ENST00000512021 366 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC016065.2-201ENST00000514530 444 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 OR6C73P-201ENST00000546432 358 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC007566.2-201ENST00000603642 413 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AL031281.1-201ENST00000604049 488 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC121761.2-201ENST00000617300 689 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 AC022509.4-201ENST00000621404 572 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 MTND5P3-201ENST00000438536 1800 ntBASIC5.27□□□□□ -1.57
LONRF3Q496Y0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LONRF3Q496Y0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 FAM3C2-201ENST00000312214 681 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 RNU6-492P-201ENST00000363035 104 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 MIR195-201ENST00000385194 87 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 ENSAP1-201ENST00000392855 326 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AL161909.1-201ENST00000397390 712 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 FCF1P2-201ENST00000415284 583 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC009480.2-201ENST00000422916 432 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC234781.2-201ENST00000426370 994 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 C4BPAP2-201ENST00000428434 478 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 CKS1BP5-201ENST00000434172 273 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 THAP5P1-201ENST00000439089 262 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC093155.1-201ENST00000440164 826 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 ARL4AP3-201ENST00000441452 574 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 RPL23AP76-201ENST00000441860 458 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC108463.1-201ENST00000450258 347 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 HMGB3P30-201ENST00000457863 606 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 TPTE2P5-203ENST00000458118 728 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC108145.1-201ENST00000503770 153 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.26□□□□□ -1.57
LONRF3Q496Y0 AC091435.1-201ENST00000505442 584 ntBASIC5.26□□□□□ -1.57
LONRF3Q496Y0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms