Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
CXCR4P61073 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
CXCR4P61073 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
CXCR4P61073 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCR4P61073 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCR4P61073 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 RNU6-317P-201ENST00000384031 107 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 EIF5P1-201ENST00000400019 1231 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCR4P61073 COX6CP17-201ENST00000421389 185 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCR4P61073 MTCYBP12-201ENST00000440559 1134 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCR4P61073 AC114755.5-201ENST00000447760 831 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCR4P61073 U3.44-201ENST00000458938 192 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCR4P61073 TPT1P3-201ENST00000492841 512 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCR4P61073 HMGB3P15-201ENST00000507326 574 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCR4P61073 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.21□□□□□ -1.9
CXCR4P61073 CYCSP30-201ENST00000546447 172 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 TRAV37-201ENST00000553906 342 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AL163153.1-201ENST00000554223 283 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCR4P61073 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCR4P61073 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCR4P61073 AL365400.2-201ENST00000605604 902 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC006023.2-201ENST00000609916 167 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC019080.5-201ENST00000624891 757 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 MIR6830-201ENST00000636015 70 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
CXCR4P61073 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCR4P61073 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CXCR4P61073 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCR4P61073 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCR4P61073 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCR4P61073 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CXCR4P61073 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 MTCO1P8-201ENST00000416914 1523 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 SPRR2C-201ENST00000290702 219 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CXCR4P61073 AL591419.1-201ENST00000427423 339 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AL117339.2-201ENST00000430475 180 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCR4P61073 AC016712.1-201ENST00000431088 378 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 FTH1P1-201ENST00000437933 532 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCR4P61073 VN1R17P-201ENST00000472048 1090 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AC108078.3-201ENST00000502633 489 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCR4P61073 AC117525.1-201ENST00000515228 503 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCR4P61073 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.2□□□□□ -1.9
CXCR4P61073 SYF2P1-201ENST00000550658 413 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCR4P61073 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCR4P61073 AC245389.2-201ENST00000616023 576 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AC243756.2-201ENST00000618406 463 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AC242843.1-201ENST00000618702 573 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CXCR4P61073 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCR4P61073 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCR4P61073 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 MTND4P34-201ENST00000572715 1371 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 AC116096.1-201ENST00000566804 2314 ntBASIC3.2□□□□□ -1.9
CXCR4P61073 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCR4P61073 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
CXCR4P61073 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.19□□□□□ -1.9
CXCR4P61073 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
CXCR4P61073 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
CXCR4P61073 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.19□□□□□ -1.9
CXCR4P61073 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.19□□□□□ -1.9
CXCR4P61073 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CXCR4P61073 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CXCR4P61073 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CXCR4P61073 MIR372-201ENST00000362225 67 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 RNU1-13P-201ENST00000384499 162 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 RNU6-244P-201ENST00000391028 104 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCR4P61073 YY1P1-201ENST00000427625 668 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 ARL5AP2-201ENST00000444698 533 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 AL157827.1-201ENST00000447622 132 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 AC012181.1-201ENST00000479895 423 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 NCOR1P1-202ENST00000486162 291 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 AP000926.3-201ENST00000497201 299 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.19□□□□□ -1.9
CXCR4P61073 AC021146.7-201ENST00000509604 775 ntBASIC3.19□□□□□ -1.9
CXCR4P61073 AC108064.1-201ENST00000513791 460 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms