Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC016717.3-201ENST00000624730 554 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTBP60709 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ACTBP60709 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
ACTBP60709 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTBP60709 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
ACTBP60709 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACTBP60709 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ACTBP60709 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.17□□□□□ -1.9
ACTBP60709 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.17□□□□□ -1.9
ACTBP60709 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
ACTBP60709 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.17□□□□□ -1.9
ACTBP60709 TRIAP1P1-201ENST00000427062 225 ntBASIC3.17□□□□□ -1.9
ACTBP60709 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.17□□□□□ -1.9
ACTBP60709 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.17□□□□□ -1.9
ACTBP60709 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
ACTBP60709 ARPC3P2-201ENST00000457786 533 ntBASIC3.17□□□□□ -1.9
ACTBP60709 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.17□□□□□ -1.9
ACTBP60709 RPS4XP22-201ENST00000480755 780 ntBASIC3.17□□□□□ -1.9
ACTBP60709 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
ACTBP60709 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 TMEM248P1-201ENST00000510579 951 ntBASIC3.17□□□□□ -1.9
ACTBP60709 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 AP001636.2-201ENST00000525517 696 ntBASIC3.17□□□□□ -1.9
ACTBP60709 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.17□□□□□ -1.9
ACTBP60709 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.17□□□□□ -1.9
ACTBP60709 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.17□□□□□ -1.9
ACTBP60709 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.17□□□□□ -1.9
ACTBP60709 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACTBP60709 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
ACTBP60709 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.17□□□□□ -1.9
ACTBP60709 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACTBP60709 AL137246.1-201ENST00000607072 977 ntBASIC3.17□□□□□ -1.9
ACTBP60709 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACTBP60709 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACTBP60709 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
ACTBP60709 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ACTBP60709 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
ACTBP60709 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ACTBP60709 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 SPRR2C-201ENST00000290702 219 ntBASIC3.16□□□□□ -1.9
ACTBP60709 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ACTBP60709 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
ACTBP60709 RNA5SP391-201ENST00000363456 119 ntBASIC3.16□□□□□ -1.9
ACTBP60709 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ACTBP60709 RNU4-31P-201ENST00000384211 141 ntBASIC3.16□□□□□ -1.9
ACTBP60709 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ACTBP60709 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.16□□□□□ -1.9
ACTBP60709 AC234782.4-201ENST00000417646 1048 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 AC244098.2-201ENST00000422068 99 ntBASIC3.16□□□□□ -1.9
ACTBP60709 RSL24D1P6-201ENST00000426934 401 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AL121578.1-201ENST00000428051 892 ntBASIC3.16□□□□□ -1.9
ACTBP60709 NDUFA5P10-201ENST00000432147 357 ntBASIC3.16□□□□□ -1.9
ACTBP60709 VDAC1P3-201ENST00000434069 851 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AL590103.1-201ENST00000434488 307 ntBASIC3.16□□□□□ -1.9
ACTBP60709 TBCAP1-201ENST00000436520 327 ntBASIC3.16□□□□□ -1.9
ACTBP60709 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.16□□□□□ -1.9
ACTBP60709 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 AC006326.1-201ENST00000445465 787 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AL590399.6-201ENST00000446396 307 ntBASIC3.16□□□□□ -1.9
ACTBP60709 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
ACTBP60709 RPS3AP6-201ENST00000484430 795 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.16□□□□□ -1.9
ACTBP60709 RN7SKP244-201ENST00000516513 307 ntBASIC3.16□□□□□ -1.9
ACTBP60709 MIR2116-201ENST00000517221 80 ntBASIC3.16□□□□□ -1.9
ACTBP60709 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.16□□□□□ -1.9
ACTBP60709 MTCO1P49-201ENST00000523429 802 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.16□□□□□ -1.9
ACTBP60709 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 AC136624.4-201ENST00000573044 370 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 SNRPGP15-201ENST00000600149 222 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AL020997.2-201ENST00000602607 184 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AP004372.1-201ENST00000604842 844 ntBASIC3.16□□□□□ -1.9
ACTBP60709 AC011816.2-201ENST00000607089 556 ntBASIC3.16□□□□□ -1.9
ACTBP60709 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ACTBP60709 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.16□□□□□ -1.9
ACTBP60709 AC073073.2-201ENST00000609827 2578 ntBASIC3.16□□□□□ -1.9
ACTBP60709 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
ACTBP60709 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ACTBP60709 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ACTBP60709 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ACTBP60709 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ACTBP60709 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
ACTBP60709 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ACTBP60709 RNU1-13P-201ENST00000384499 162 ntBASIC3.15□□□□□ -1.91
ACTBP60709 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ACTBP60709 FABP12P1-201ENST00000401911 322 ntBASIC3.15□□□□□ -1.91
ACTBP60709 NUP35P2-201ENST00000416748 943 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms