Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL35AP3-201ENST00000414680 288 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 AC099677.3-201ENST00000427081 395 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 CBX3P6-201ENST00000430257 527 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 RPS20P5-201ENST00000434808 360 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.05□□□□□ -1.44
NFKB1P19838 AL663074.2-201ENST00000440621 479 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.05□□□□□ -1.44
NFKB1P19838 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.05□□□□□ -1.44
NFKB1P19838 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 AC005165.2-201ENST00000466070 380 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RN7SL269P-201ENST00000467795 305 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC098847.1-201ENST00000473094 348 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RPL5P22-201ENST00000480199 884 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RPL38P3-201ENST00000484463 213 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RPS4XP14-201ENST00000493072 781 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AK3P4-201ENST00000504283 583 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 AC004062.1-201ENST00000509926 645 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.05□□□□□ -1.44
NFKB1P19838 AP000907.2-201ENST00000530827 353 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 OR5B10P-201ENST00000532869 642 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.05□□□□□ -1.44
NFKB1P19838 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.05□□□□□ -1.44
NFKB1P19838 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.05□□□□□ -1.44
NFKB1P19838 MIR3146-201ENST00000580367 79 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC105224.1-201ENST00000587055 421 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 AL359091.2-201ENST00000609303 556 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 AC092807.2-201ENST00000609367 243 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 RMST_9.1-201ENST00000619945 193 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NFKB1P19838 AC012254.3-201ENST00000591183 2117 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NFKB1P19838 AL591135.1-201ENST00000401578 5914 ntBASIC6.05□□□□□ -1.44
NFKB1P19838 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NFKB1P19838 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.04□□□□□ -1.44
NFKB1P19838 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NFKB1P19838 AC140479.2-201ENST00000421567 3130 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AL359955.1-201ENST00000455242 3275 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 Y_RNA.373-201ENST00000365600 103 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 Y_RNA.414-201ENST00000384011 101 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 RNU6-38P-201ENST00000384085 107 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 Y_RNA.530-201ENST00000384587 101 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 MIR548K-201ENST00000408406 116 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 MIR548F5-201ENST00000408421 86 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 RNU6-370P-201ENST00000411008 104 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AC114482.1-201ENST00000418010 247 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.04□□□□□ -1.44
NFKB1P19838 PRUNEP1-201ENST00000425846 705 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.04□□□□□ -1.44
NFKB1P19838 AC073410.1-201ENST00000435125 589 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AL445928.1-201ENST00000435545 222 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.04□□□□□ -1.44
NFKB1P19838 PRPF38AP2-201ENST00000438179 851 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 RPS12P17-201ENST00000438591 377 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.04□□□□□ -1.44
NFKB1P19838 HSPE1P28-201ENST00000443139 211 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AC107399.1-201ENST00000451226 265 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 HMGB1P4-201ENST00000455362 567 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 BTF3P15-201ENST00000455606 336 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.04□□□□□ -1.44
NFKB1P19838 RNU6-333P-201ENST00000459117 107 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 PFN1P6-201ENST00000476786 399 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 RPL23AP72-201ENST00000492447 435 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.04□□□□□ -1.44
NFKB1P19838 TXNP6-201ENST00000510190 310 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.04□□□□□ -1.44
NFKB1P19838 RNA5SP92-201ENST00000516437 110 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 RN7SKP238-201ENST00000516483 249 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 SOD1P3-201ENST00000518682 454 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AP001804.3-201ENST00000525146 880 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NFKB1P19838 AC084121.1-201ENST00000533882 835 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.04□□□□□ -1.44
NFKB1P19838 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.04□□□□□ -1.44
NFKB1P19838 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.04□□□□□ -1.44
NFKB1P19838 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.04□□□□□ -1.44
NFKB1P19838 AL022099.1-201ENST00000604551 712 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AC092266.1-201ENST00000610958 165 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 AL136228.1-201ENST00000622221 319 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.04□□□□□ -1.44
NFKB1P19838 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms