Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.08□□□□□ -1.92
APOC1P02654 MIR4474-201ENST00000579189 78 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC008507.1-201ENST00000587506 734 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC010591.1-201ENST00000603941 649 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AL590240.3-201ENST00000621416 943 ntBASIC3.08□□□□□ -1.92
APOC1P02654 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.08□□□□□ -1.92
APOC1P02654 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APOC1P02654 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 GTF2H2B-203ENST00000508065 1432 ntBASIC3.08□□□□□ -1.92
APOC1P02654 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
APOC1P02654 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
APOC1P02654 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
APOC1P02654 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.08□□□□□ -1.92
APOC1P02654 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOC1P02654 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
APOC1P02654 RNA5SP383-201ENST00000362934 120 ntBASIC3.07□□□□□ -1.92
APOC1P02654 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
APOC1P02654 GSTA12P-201ENST00000402398 508 ntBASIC3.07□□□□□ -1.92
APOC1P02654 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.07□□□□□ -1.92
APOC1P02654 RN7SKP53-201ENST00000411337 315 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC098592.2-201ENST00000413158 265 ntBASIC3.07□□□□□ -1.92
APOC1P02654 HMGB3P23-201ENST00000414981 585 ntBASIC3.07□□□□□ -1.92
APOC1P02654 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.07□□□□□ -1.92
APOC1P02654 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 AP000907.1-201ENST00000428428 510 ntBASIC3.07□□□□□ -1.92
APOC1P02654 OR4F13P-201ENST00000428478 931 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOC1P02654 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 RPL21P103-201ENST00000479921 488 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.07□□□□□ -1.92
APOC1P02654 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.07□□□□□ -1.92
APOC1P02654 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.07□□□□□ -1.92
APOC1P02654 FABP5P12-201ENST00000515543 389 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC107934.2-201ENST00000518653 310 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.07□□□□□ -1.92
APOC1P02654 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.07□□□□□ -1.92
APOC1P02654 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
APOC1P02654 SYF2P1-201ENST00000550658 413 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
APOC1P02654 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 AP000919.1-202ENST00000581139 1264 ntBASIC3.07□□□□□ -1.92
APOC1P02654 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.07□□□□□ -1.92
APOC1P02654 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOC1P02654 RNA5SP108-201ENST00000605921 117 ntBASIC3.07□□□□□ -1.92
APOC1P02654 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
APOC1P02654 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.07□□□□□ -1.92
APOC1P02654 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOC1P02654 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOC1P02654 AC090337.1-201ENST00000579651 2074 ntBASIC3.07□□□□□ -1.92
APOC1P02654 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
APOC1P02654 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
APOC1P02654 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOC1P02654 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
APOC1P02654 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOC1P02654 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOC1P02654 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
APOC1P02654 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
APOC1P02654 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOC1P02654 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOC1P02654 RPL7P60-201ENST00000397636 735 ntBASIC3.06□□□□□ -1.92
APOC1P02654 HMGB3P18-201ENST00000406327 590 ntBASIC3.06□□□□□ -1.92
APOC1P02654 RNA5SP31-201ENST00000411144 127 ntBASIC3.06□□□□□ -1.92
APOC1P02654 RPL31P2-201ENST00000413849 377 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AL513174.1-201ENST00000423182 629 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.06□□□□□ -1.92
APOC1P02654 BX890604.2-201ENST00000427883 474 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AL590103.1-201ENST00000434488 307 ntBASIC3.06□□□□□ -1.92
APOC1P02654 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOC1P02654 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.06□□□□□ -1.92
APOC1P02654 RPS15AP29-201ENST00000445539 400 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.06□□□□□ -1.92
APOC1P02654 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.06□□□□□ -1.92
APOC1P02654 NUTF2P7-201ENST00000453086 375 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.06□□□□□ -1.92
APOC1P02654 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
APOC1P02654 AC091959.2-201ENST00000477363 321 ntBASIC3.06□□□□□ -1.92
APOC1P02654 FCF1P3-201ENST00000496394 590 ntBASIC3.06□□□□□ -1.92
APOC1P02654 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.06□□□□□ -1.92
APOC1P02654 AC108471.1-201ENST00000513977 287 ntBASIC3.06□□□□□ -1.92
APOC1P02654 SNORA70.17-201ENST00000516449 133 ntBASIC3.06□□□□□ -1.92
APOC1P02654 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.06□□□□□ -1.92
APOC1P02654 IGKV2D-19-201ENST00000523346 262 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.06□□□□□ -1.92
APOC1P02654 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
APOC1P02654 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.06□□□□□ -1.92
APOC1P02654 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.06□□□□□ -1.92
APOC1P02654 MIR3160-1-201ENST00000577972 85 ntBASIC3.06□□□□□ -1.92
APOC1P02654 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.06□□□□□ -1.92
APOC1P02654 AC110792.3-201ENST00000595906 1614 ntBASIC3.06□□□□□ -1.92
APOC1P02654 VN1R85P-201ENST00000601587 426 ntBASIC3.06□□□□□ -1.92
APOC1P02654 GMCL1P2-201ENST00000605230 823 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms