Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 KCTD9P3-201ENST00000434597 1169 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC1.42□□□□□ -2.18
USH2AO75445 RNA5SP480-201ENST00000516840 109 ntBASIC1.42□□□□□ -2.18
USH2AO75445 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 AC087888.1-201ENST00000550884 1254 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AC009163.5-201ENST00000575421 637 ntBASIC1.42□□□□□ -2.18
USH2AO75445 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.42□□□□□ -2.18
USH2AO75445 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.42□□□□□ -2.18
USH2AO75445 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 LINC01355-201ENST00000566551 5444 ntBASIC1.42□□□□□ -2.18
USH2AO75445 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
USH2AO75445 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 UBE3AP2-201ENST00000429033 2259 ntBASIC1.42□□□□□ -2.18
USH2AO75445 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 RNA5SP42-201ENST00000364278 115 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AC019097.1-201ENST00000424783 735 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC1.42□□□□□ -2.18
USH2AO75445 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC1.42□□□□□ -2.18
USH2AO75445 AL133247.2-201ENST00000603236 482 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 AP006437.1-201ENST00000641440 3685 ntBASIC1.42□□□□□ -2.18
USH2AO75445 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.42□□□□□ -2.18
USH2AO75445 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
USH2AO75445 RNA5SP439-201ENST00000617595 124 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AC103798.2-201ENST00000624292 632 ntBASIC1.42□□□□□ -2.18
USH2AO75445 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USH2AO75445 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 RN7SKP223-201ENST00000410582 62 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 FAM103A2P-201ENST00000444122 354 ntBASIC1.41□□□□□ -2.18
USH2AO75445 MTCO1P42-201ENST00000457379 726 ntBASIC1.41□□□□□ -2.18
USH2AO75445 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC1.41□□□□□ -2.18
USH2AO75445 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC1.41□□□□□ -2.18
USH2AO75445 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.41□□□□□ -2.18
USH2AO75445 SERPINE4P-201ENST00000554978 281 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.41□□□□□ -2.18
USH2AO75445 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC1.41□□□□□ -2.18
USH2AO75445 BRDTP1-201ENST00000605735 677 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC123768.4-201ENST00000616244 701 ntBASIC1.41□□□□□ -2.18
USH2AO75445 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USH2AO75445 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 VDAC2P1-201ENST00000399358 958 ntBASIC1.41□□□□□ -2.18
USH2AO75445 Z98742.2-201ENST00000431564 187 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 HIGD1AP1-201ENST00000550979 275 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC007954.1-201ENST00000554198 494 ntBASIC1.41□□□□□ -2.18
USH2AO75445 MIR8070-201ENST00000616510 88 ntBASIC1.41□□□□□ -2.18
USH2AO75445 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 RPS4XP7-201ENST00000406274 780 ntBASIC1.41□□□□□ -2.18
USH2AO75445 RN7SKP220-201ENST00000410611 288 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AL592045.1-201ENST00000429867 352 ntBASIC1.41□□□□□ -2.18
USH2AO75445 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.41□□□□□ -2.18
USH2AO75445 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC1.41□□□□□ -2.18
USH2AO75445 AC023043.2-201ENST00000589678 1026 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AL078595.2-201ENST00000605309 1780 ntBASIC1.41□□□□□ -2.18
USH2AO75445 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
USH2AO75445 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC1.41□□□□□ -2.18
USH2AO75445 Y_RNA.112-201ENST00000363250 102 ntBASIC1.41□□□□□ -2.18
USH2AO75445 SNORA25.9-201ENST00000365087 128 ntBASIC1.41□□□□□ -2.18
USH2AO75445 MIR196B-201ENST00000384852 84 ntBASIC1.41□□□□□ -2.18
USH2AO75445 MIR34A-201ENST00000385130 110 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AL139415.2-201ENST00000431968 163 ntBASIC1.41□□□□□ -2.18
USH2AO75445 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms