Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DHFRP5-201ENST00000406944 564 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 SYF2P2-201ENST00000417620 583 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
UPK1AO00322 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.28□□□□□ -1.88
UPK1AO00322 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.28□□□□□ -1.88
UPK1AO00322 TPMTP4-201ENST00000450749 678 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 MTND3P6-201ENST00000485242 339 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.28□□□□□ -1.88
UPK1AO00322 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.28□□□□□ -1.88
UPK1AO00322 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
UPK1AO00322 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.28□□□□□ -1.88
UPK1AO00322 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.28□□□□□ -1.88
UPK1AO00322 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.28□□□□□ -1.88
UPK1AO00322 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.28□□□□□ -1.88
UPK1AO00322 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.28□□□□□ -1.88
UPK1AO00322 MIMT1-201ENST00000597105 1050 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
UPK1AO00322 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.28□□□□□ -1.88
UPK1AO00322 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
UPK1AO00322 NMD3P1-201ENST00000439704 1488 ntBASIC3.28□□□□□ -1.88
UPK1AO00322 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
UPK1AO00322 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
UPK1AO00322 AL136964.1-201ENST00000622038 2990 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.27□□□□□ -1.89
UPK1AO00322 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
UPK1AO00322 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.27□□□□□ -1.89
UPK1AO00322 AC025750.1-201ENST00000399891 379 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 MTND4P11-201ENST00000417020 1058 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.27□□□□□ -1.89
UPK1AO00322 RPS24P8-201ENST00000431490 402 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.27□□□□□ -1.89
UPK1AO00322 AC073387.1-201ENST00000453261 709 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 HMGN2P7-201ENST00000456186 273 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 CFTRP1-201ENST00000456646 183 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC020898.1-201ENST00000474167 787 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AL049830.2-201ENST00000480072 201 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC005726.1-201ENST00000494679 427 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC023050.1-201ENST00000498198 304 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 OR52A4P-203ENST00000498233 1014 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC104619.4-201ENST00000510773 249 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.27□□□□□ -1.89
UPK1AO00322 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.27□□□□□ -1.89
UPK1AO00322 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.27□□□□□ -1.89
UPK1AO00322 AL049870.4-201ENST00000555741 486 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC023158.1-201ENST00000561632 1025 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.27□□□□□ -1.89
UPK1AO00322 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.27□□□□□ -1.89
UPK1AO00322 AC006130.2-201ENST00000586202 326 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 BNIP3P7-201ENST00000605641 516 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AC073111.2-201ENST00000605657 1075 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 AP003072.4-201ENST00000624580 310 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 CR392039.4-201ENST00000624968 501 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 AC004972.1-201ENST00000623934 2209 ntBASIC3.27□□□□□ -1.89
UPK1AO00322 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPK1AO00322 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.27□□□□□ -1.89
UPK1AO00322 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK1AO00322 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
UPK1AO00322 PWAR6-201ENST00000552334 4618 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC022893.2-201ENST00000564832 3296 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPK1AO00322 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK1AO00322 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK1AO00322 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
UPK1AO00322 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AL359837.1-201ENST00000381357 287 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 RNU6-185P-201ENST00000384421 107 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AL356967.1-201ENST00000406305 431 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC126124.2-201ENST00000413542 321 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.26□□□□□ -1.89
UPK1AO00322 AL359073.1-201ENST00000448036 403 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 U3.44-201ENST00000458938 192 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 RN7SL542P-201ENST00000467147 294 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.26□□□□□ -1.89
UPK1AO00322 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.26□□□□□ -1.89
UPK1AO00322 TXNP6-201ENST00000510190 310 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 RN7SKP13-201ENST00000515933 244 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 RNU1-45P-201ENST00000517191 141 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK1AO00322 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.26□□□□□ -1.89
UPK1AO00322 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.26□□□□□ -1.89
UPK1AO00322 AP000919.1-202ENST00000581139 1264 ntBASIC3.26□□□□□ -1.89
UPK1AO00322 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.26□□□□□ -1.89
UPK1AO00322 AC067852.3-201ENST00000589177 561 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms