Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HMGN3P1-201ENST00000453847 193 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC087879.1-201ENST00000474343 374 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AP000893.1-201ENST00000474462 794 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC069528.1-202ENST00000482888 637 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC093755.1-201ENST00000512950 1023 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RNU6-415P-201ENST00000516252 97 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP135-201ENST00000517019 125 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC008694.2-201ENST00000517591 306 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 OR10V3P-201ENST00000525712 725 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 PHBP17-201ENST00000528576 541 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 MTCYBP28-201ENST00000566728 1132 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RN7SL339P-201ENST00000580597 296 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AL161729.3-201ENST00000603533 673 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC010680.4-201ENST00000605334 543 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC078899.5-201ENST00000612475 178 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SNX18P1Y-201ENST00000616231 511 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AL445363.3-201ENST00000623080 671 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 AC090772.4-201ENST00000623599 362 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 OR4G3P-201ENST00000633500 913 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 MFSD8-245ENST00000641743 948 ntBASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NPIPA3F8WFD2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 MTND5P28-201ENST00000438005 1594 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 HMGB1P5-201ENST00000255320 642 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RNU1-15P-201ENST00000353977 144 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RNA5SP502-201ENST00000362694 119 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RNU6-839P-201ENST00000363347 108 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RNU6-707P-201ENST00000364647 95 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC025750.1-201ENST00000399891 379 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AL133264.1-201ENST00000407157 562 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AL139098.1-201ENST00000407291 389 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RN7SKP182-201ENST00000410772 298 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RN7SKP167-201ENST00000411047 285 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC073264.1-201ENST00000411508 416 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 MTCO2P8-201ENST00000412213 658 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RAC1P3-201ENST00000416129 580 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RPS23P10-201ENST00000416185 486 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AL161631.1-201ENST00000417933 486 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC106883.1-201ENST00000418805 562 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 ELOCP6-201ENST00000429066 328 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BTF3P10-201ENST00000433415 495 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC122718.1-201ENST00000439448 744 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 HMGB3P6-201ENST00000444896 598 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 CDC27P1-201ENST00000445384 715 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC239367.2-201ENST00000447309 705 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BX276092.4-201ENST00000452056 248 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 ELOCP12-201ENST00000458706 328 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 FAM133DP-201ENST00000464802 691 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RPS27AP13-201ENST00000498403 237 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 GTF2IP9-201ENST00000502460 301 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 RN7SKP234-201ENST00000517173 224 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 OR8R1P-201ENST00000543943 764 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC106785.1-201ENST00000565935 262 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AP001180.3-201ENST00000582221 145 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC025946.2-201ENST00000603398 234 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 YWHAQP7-201ENST00000603536 658 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AL160237.3-201ENST00000604114 1013 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AC010680.3-201ENST00000604215 520 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 AP000240.1-201ENST00000609910 452 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 FAM27D1-201ENST00000612308 341 ntBASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPIPA3F8WFD2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms