Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC004805.3-201ENST00000603178 310 ntBASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR6864-201ENST00000617935 70 ntBASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 U4.1-201ENST00000620349 87 ntBASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 AC055839.1-201ENST00000634467 498 ntBASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
PCDHGA11Q9Y5H2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 GNL2P1-201ENST00000451274 2190 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-1287P-201ENST00000362914 107 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 Y_RNA.167-201ENST00000363735 109 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SKP257-201ENST00000364525 309 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 LCN1P2-201ENST00000372030 223 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-1060P-201ENST00000384664 107 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RPL12P23-201ENST00000405880 490 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-954P-201ENST00000411355 107 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 VDAC1P9-201ENST00000412766 841 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RPL31P12-201ENST00000422587 358 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC005019.1-201ENST00000436455 431 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 snoU13.7-201ENST00000459220 104 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC006967.1-201ENST00000467608 589 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SL165P-201ENST00000477476 291 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 COX7A2P2-201ENST00000505291 250 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-1137P-201ENST00000517073 99 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 FAM60DP-201ENST00000524174 632 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC023442.1-201ENST00000531247 422 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC023968.1-201ENST00000560719 475 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC008269.2-201ENST00000561915 1105 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AF038458.1-201ENST00000588406 262 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC104662.1-201ENST00000604448 511 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC023813.4-201ENST00000607580 580 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR6883-201ENST00000614952 78 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR6849-201ENST00000618543 69 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC069234.4-201ENST00000621276 412 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AC025034.2-201ENST00000623264 286 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AL122126.1-201ENST00000546905 1318 ntBASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA11Q9Y5H2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 Y_RNA.148-201ENST00000363557 117 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SKP237-201ENST00000364663 301 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 POLHP1-201ENST00000411806 470 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 AC245884.2-201ENST00000426257 404 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 FABP7P2-201ENST00000429946 379 ntBASIC6.19□□□□□ -1.42
PCDHGA11Q9Y5H2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms