Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC104307.1-201ENST00000616142 196 ntBASIC3.38□□□□□ -1.87
DUX4Q9UBX2 AC022079.2-201ENST00000619739 566 ntBASIC3.38□□□□□ -1.87
DUX4Q9UBX2 AC006065.5-201ENST00000623427 349 ntBASIC3.38□□□□□ -1.87
DUX4Q9UBX2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 U6.107-201ENST00000637108 79 ntBASIC3.38□□□□□ -1.87
DUX4Q9UBX2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DUX4Q9UBX2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 FAM91A3P-201ENST00000456826 2544 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RNA5SP283-201ENST00000365604 119 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 ENSAP1-201ENST00000392855 326 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 HLFP1-201ENST00000402375 499 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AL353692.2-201ENST00000407054 335 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AL117339.2-201ENST00000430475 180 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC007000.2-201ENST00000442564 487 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 HMGB1P48-201ENST00000446155 598 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RPL7P1-201ENST00000468161 747 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RPL7P9-201ENST00000468715 747 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 MIR2116-201ENST00000517221 80 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC103833.1-201ENST00000517442 172 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 CIR1P1-201ENST00000524055 1133 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC106785.1-201ENST00000565935 262 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 CYP2C60P-201ENST00000566088 139 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC233266.2-201ENST00000567067 528 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 BNIP3P22-201ENST00000593399 556 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RNU4-89P-201ENST00000607443 133 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 C2orf27A-204ENST00000623058 969 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 RNA5SP196-201ENST00000625967 102 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 XPOTP1-201ENST00000443317 2398 ntBASIC3.37□□□□□ -1.87
DUX4Q9UBX2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
DUX4Q9UBX2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC090337.1-201ENST00000579651 2074 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 MIR134-201ENST00000385258 73 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 NUP35P2-201ENST00000416748 943 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 ARL2BPP3-201ENST00000421226 480 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC092832.1-201ENST00000422934 400 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC002075.2-201ENST00000425207 252 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AL691449.1-201ENST00000426570 421 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 RPL29P29-201ENST00000448725 423 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AL162151.2-201ENST00000448875 158 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 RPS4XP15-201ENST00000489210 795 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 TMEM248P1-201ENST00000510579 951 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 RN7SKP283-201ENST00000517197 270 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 IGKV2-23-201ENST00000518729 323 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 CENPUP2-201ENST00000555897 1186 ntBASIC3.36□□□□□ -1.87
DUX4Q9UBX2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.36□□□□□ -1.87
DUX4Q9UBX2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms