Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 ASNSP1-201ENST00000518311 1939 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 NMD3P1-201ENST00000439704 1488 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 SNORD67-201ENST00000390833 111 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 OR51A3P-201ENST00000413596 924 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 SNORD53-201ENST00000579969 78 ntBASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD1Q96PZ7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AC078785.3-201ENST00000476607 425 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 RPL23AP73-201ENST00000492507 471 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AC034159.1-201ENST00000513885 583 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AC138761.3-201ENST00000579993 334 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AL158827.2-201ENST00000602494 330 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AC046143.2-201ENST00000609789 160 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 MIR486-1-201ENST00000612171 68 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 AL691447.3-201ENST00000635020 330 ntBASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
CSMD1Q96PZ7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 HSPA8P4-201ENST00000511877 1920 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 MIR34A-201ENST00000385130 110 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AC004552.1-201ENST00000419089 348 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 MTND2P25-201ENST00000449028 610 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AC087312.1-201ENST00000471411 480 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AL513302.2-201ENST00000562313 1842 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AL360182.1-201ENST00000397433 468 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 NANOGP6-201ENST00000429190 847 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 RPS3P1-201ENST00000456781 192 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AC021205.1-201ENST00000468797 348 ntBASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.65□□□□□ -1.99
CSMD1Q96PZ7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 JKAMPP1-201ENST00000413804 919 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 SKP1P1-201ENST00000438081 489 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC124916.1-201ENST00000444020 547 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 FCF1P8-201ENST00000510322 597 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC008837.1-201ENST00000511513 412 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 RNA5SP154-201ENST00000516193 111 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC007390.2-201ENST00000606229 3803 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 TRIM60P18-201ENST00000441518 828 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AP000936.2-201ENST00000447151 681 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC108210.2-201ENST00000503681 201 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC112184.1-201ENST00000505179 312 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 OR7A8P-201ENST00000595427 913 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC020914.4-201ENST00000597690 277 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AL356274.1-201ENST00000617064 410 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AC138627.1-204ENST00000641894 765 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 AL732372.2-225ENST00000642124 456 ntBASIC2.64□□□□□ -1.99
CSMD1Q96PZ7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms