Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 COX6B1P6-201ENST00000522347 255 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AGGF1P8-201ENST00000562979 1000 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC090751.1-201ENST00000566966 267 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC079171.1-201ENST00000568788 914 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 BNIP3P22-201ENST00000593399 556 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC245389.1-201ENST00000605141 529 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC128687.2-201ENST00000609657 566 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 MIR486-1-201ENST00000612171 68 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC090772.4-201ENST00000623599 362 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 CR392039.4-201ENST00000624968 501 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 ATE1-AS1-202ENST00000636460 506 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC114546.3-201ENST00000623582 1734 ntBASIC3.8□□□□□ -1.8
CCDC71Q8IV32 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC71Q8IV32 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 MTCO1P6-201ENST00000481192 1384 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC104446.1-201ENST00000613728 1321 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RLIMP1-201ENST00000339626 1680 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 MIR554-201ENST00000384874 96 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 ATP5F1P3-201ENST00000397213 657 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RN7SKP182-201ENST00000410772 298 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RN7SKP33-201ENST00000410942 340 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RNU2-6P-201ENST00000411404 190 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 TCEA1P2-201ENST00000420496 906 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 EIF1P3-201ENST00000423841 334 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 CEACAMP1-201ENST00000434624 1035 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC002542.1-201ENST00000440683 193 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC092809.1-201ENST00000441469 474 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RPL21P89-201ENST00000444021 467 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 HMGB1P16-201ENST00000447155 540 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 NIPA2P2-201ENST00000496376 1083 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 BTF3L4P4-201ENST00000506381 449 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC108064.1-201ENST00000513791 460 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 PRELID3BP4-201ENST00000515476 571 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RNA5SP143-201ENST00000516936 115 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 HMGB1P1-201ENST00000522557 636 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC010306.1-201ENST00000523223 1117 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 MTND1P6-201ENST00000523621 946 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC091515.1-201ENST00000548110 679 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC141257.3-201ENST00000572906 215 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 RNU4-89P-201ENST00000607443 133 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC018754.1-201ENST00000607486 925 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC013437.2-201ENST00000639587 677 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AC092162.3-201ENST00000624511 1624 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 AL353743.4-201ENST00000422653 1547 ntBASIC3.79□□□□□ -1.8
CCDC71Q8IV32 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71Q8IV32 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 AC046144.1-201ENST00000478559 1853 ntBASIC3.78□□□□□ -1.8
CCDC71Q8IV32 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 SNORA62.3-201ENST00000365110 153 ntBASIC3.78□□□□□ -1.8
CCDC71Q8IV32 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
CCDC71Q8IV32 OR52E6-202ENST00000379946 954 ntBASIC3.78□□□□□ -1.8
CCDC71Q8IV32 MIR122-201ENST00000385044 85 ntBASIC3.78□□□□□ -1.8
CCDC71Q8IV32 VN1R51P-201ENST00000411675 945 ntBASIC3.78□□□□□ -1.8
CCDC71Q8IV32 OR8G2P-201ENST00000412796 908 ntBASIC3.78□□□□□ -1.8
CCDC71Q8IV32 PGBD4P8-201ENST00000412993 562 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms