Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
USF2Q15853 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 AL122126.1-201ENST00000546905 1318 ntBASIC3.19□□□□□ -1.9
USF2Q15853 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 AL591034.1-201ENST00000407447 340 ntBASIC3.19□□□□□ -1.9
USF2Q15853 RNU4-78P-201ENST00000410940 126 ntBASIC3.19□□□□□ -1.9
USF2Q15853 MTND4P22-201ENST00000413116 1169 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
USF2Q15853 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 RPL17P36-201ENST00000420302 549 ntBASIC3.19□□□□□ -1.9
USF2Q15853 HSPE1P1-201ENST00000421494 318 ntBASIC3.19□□□□□ -1.9
USF2Q15853 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC011742.1-201ENST00000431448 434 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 AC093392.2-201ENST00000450682 337 ntBASIC3.19□□□□□ -1.9
USF2Q15853 RPS24P6-201ENST00000452670 400 ntBASIC3.19□□□□□ -1.9
USF2Q15853 Z95152.1-201ENST00000453556 656 ntBASIC3.19□□□□□ -1.9
USF2Q15853 MRPL35P4-201ENST00000453682 566 ntBASIC3.19□□□□□ -1.9
USF2Q15853 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 AC013356.1-201ENST00000489027 564 ntBASIC3.19□□□□□ -1.9
USF2Q15853 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 IGBP1P5-201ENST00000507524 1000 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 AC008958.1-201ENST00000511047 682 ntBASIC3.19□□□□□ -1.9
USF2Q15853 SNORA31.20-201ENST00000517111 133 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 MED28P5-201ENST00000528254 438 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.19□□□□□ -1.9
USF2Q15853 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 TVP23BP1-201ENST00000557500 617 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 MIR5096-201ENST00000583713 70 ntBASIC3.19□□□□□ -1.9
USF2Q15853 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.19□□□□□ -1.9
USF2Q15853 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.19□□□□□ -1.9
USF2Q15853 MRPS35P3-201ENST00000603189 709 ntBASIC3.19□□□□□ -1.9
USF2Q15853 AP000255.1-201ENST00000610276 676 ntBASIC3.19□□□□□ -1.9
USF2Q15853 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.19□□□□□ -1.9
USF2Q15853 CR381670.1-201ENST00000624291 1693 ntBASIC3.19□□□□□ -1.9
USF2Q15853 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.19□□□□□ -1.9
USF2Q15853 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
USF2Q15853 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 AC107081.3-201ENST00000612715 2034 ntBASIC3.19□□□□□ -1.9
USF2Q15853 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USF2Q15853 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USF2Q15853 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
USF2Q15853 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USF2Q15853 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.18□□□□□ -1.9
USF2Q15853 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USF2Q15853 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
USF2Q15853 RAD1P1-201ENST00000231383 813 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
USF2Q15853 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
USF2Q15853 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AL583834.1-201ENST00000406943 343 ntBASIC3.18□□□□□ -1.9
USF2Q15853 RAB28P1-201ENST00000411517 641 ntBASIC3.18□□□□□ -1.9
USF2Q15853 ELOCP19-201ENST00000411919 318 ntBASIC3.18□□□□□ -1.9
USF2Q15853 HMGB3P23-201ENST00000414981 585 ntBASIC3.18□□□□□ -1.9
USF2Q15853 EIF2S2P3-201ENST00000428356 999 ntBASIC3.18□□□□□ -1.9
USF2Q15853 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.18□□□□□ -1.9
USF2Q15853 MRPS33P4-201ENST00000434892 317 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.18□□□□□ -1.9
USF2Q15853 CBX1P1-201ENST00000440184 427 ntBASIC3.18□□□□□ -1.9
USF2Q15853 RABEPKP1-201ENST00000440529 1026 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC092809.1-201ENST00000441469 474 ntBASIC3.18□□□□□ -1.9
USF2Q15853 TPT1P12-201ENST00000448968 492 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 AC093824.1-201ENST00000508796 343 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC004062.1-201ENST00000509926 645 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 RNA5SP468-201ENST00000516782 93 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC010306.1-201ENST00000523223 1117 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 AC019227.1-201ENST00000526902 510 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC009643.1-201ENST00000532030 391 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms