Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM3P62310 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
LSM3P62310 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.81□□□□□ -1.96
LSM3P62310 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LSM3P62310 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM3P62310 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM3P62310 RNA5SP283-201ENST00000365604 119 ntBASIC2.8□□□□□ -1.96
LSM3P62310 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LSM3P62310 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM3P62310 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM3P62310 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM3P62310 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM3P62310 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM3P62310 ATP5C1P1-201ENST00000441945 895 ntBASIC2.8□□□□□ -1.96
LSM3P62310 RPS29P33-201ENST00000456717 146 ntBASIC2.8□□□□□ -1.96
LSM3P62310 IGKV2-26-201ENST00000518305 343 ntBASIC2.8□□□□□ -1.96
LSM3P62310 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
LSM3P62310 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM3P62310 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM3P62310 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM3P62310 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM3P62310 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM3P62310 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.8□□□□□ -1.96
LSM3P62310 AC099669.2-201ENST00000616549 437 ntBASIC2.8□□□□□ -1.96
LSM3P62310 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM3P62310 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.8□□□□□ -1.96
LSM3P62310 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LSM3P62310 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.8□□□□□ -1.96
LSM3P62310 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM3P62310 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM3P62310 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM3P62310 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM3P62310 SYT14P1-202ENST00000600441 1448 ntBASIC2.79□□□□□ -1.96
LSM3P62310 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LSM3P62310 AP001148.1-201ENST00000624124 2359 ntBASIC2.79□□□□□ -1.96
LSM3P62310 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM3P62310 ASNSP3-201ENST00000451989 1306 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC118273.1-201ENST00000525324 3006 ntBASIC2.79□□□□□ -1.96
LSM3P62310 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LSM3P62310 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM3P62310 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LSM3P62310 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM3P62310 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM3P62310 RNU6-225P-201ENST00000384613 103 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC110754.1-201ENST00000399740 601 ntBASIC2.79□□□□□ -1.96
LSM3P62310 SNORA11.5-201ENST00000408163 128 ntBASIC2.79□□□□□ -1.96
LSM3P62310 CRYBB2P1-203ENST00000415709 538 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AL139281.1-201ENST00000422120 335 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AL035458.1-201ENST00000433096 585 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 NOTCH2P1-201ENST00000443481 624 ntBASIC2.79□□□□□ -1.96
LSM3P62310 RPL21P89-201ENST00000444021 467 ntBASIC2.79□□□□□ -1.96
LSM3P62310 TVP23BP2-201ENST00000455082 615 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 SNORD108-201ENST00000459332 71 ntBASIC2.79□□□□□ -1.96
LSM3P62310 SNRPGP3-201ENST00000469405 227 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC010683.1-201ENST00000473673 378 ntBASIC2.79□□□□□ -1.96
LSM3P62310 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM3P62310 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM3P62310 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 AC092868.3-201ENST00000560515 784 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM3P62310 AC006270.2-201ENST00000578523 652 ntBASIC2.79□□□□□ -1.96
LSM3P62310 ZNF415P1-201ENST00000582279 1166 ntBASIC2.79□□□□□ -1.96
LSM3P62310 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM3P62310 AC067852.4-201ENST00000590314 478 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC073348.1-201ENST00000623002 331 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC019080.5-201ENST00000624891 757 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC138649.5-201ENST00000637456 137 ntBASIC2.79□□□□□ -1.96
LSM3P62310 AC117529.2-201ENST00000512159 2068 ntBASIC2.79□□□□□ -1.96
LSM3P62310 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
LSM3P62310 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LSM3P62310 AF127577.6-201ENST00000623352 2191 ntBASIC2.78□□□□□ -1.96
LSM3P62310 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM3P62310 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LSM3P62310 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM3P62310 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM3P62310 AC138393.1-206ENST00000540997 1886 ntBASIC2.78□□□□□ -1.96
LSM3P62310 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM3P62310 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM3P62310 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
LSM3P62310 SNORD17-201ENST00000390930 237 ntBASIC2.78□□□□□ -1.96
LSM3P62310 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
LSM3P62310 RN7SKP222-201ENST00000410651 315 ntBASIC2.78□□□□□ -1.96
LSM3P62310 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM3P62310 NPM1P24-201ENST00000428039 894 ntBASIC2.78□□□□□ -1.96
LSM3P62310 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.78□□□□□ -1.96
LSM3P62310 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 COX6CP2-201ENST00000444980 225 ntBASIC2.78□□□□□ -1.96
LSM3P62310 AL157884.3-201ENST00000448273 1184 ntBASIC2.78□□□□□ -1.96
LSM3P62310 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 AC089999.1-201ENST00000460336 374 ntBASIC2.78□□□□□ -1.96
LSM3P62310 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
LSM3P62310 RPL7P23-201ENST00000493874 747 ntBASIC2.78□□□□□ -1.96
LSM3P62310 AC012170.1-201ENST00000495139 359 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms