Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL136231.1-201ENST00000429407 730 ntBASIC5.78□□□□□ -1.48
RTP1P59025 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP1P59025 RPL21P110-201ENST00000433345 446 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 KNOP1P3-201ENST00000446933 426 ntBASIC5.78□□□□□ -1.48
RTP1P59025 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RTP1P59025 AC010307.1-201ENST00000467206 836 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AL161747.1-201ENST00000480068 358 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC108078.1-201ENST00000508073 725 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC048346.1-201ENST00000510247 144 ntBASIC5.78□□□□□ -1.48
RTP1P59025 MTND3P22-201ENST00000510932 243 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC098976.1-201ENST00000513014 541 ntBASIC5.78□□□□□ -1.48
RTP1P59025 RNA5SP135-201ENST00000517019 125 ntBASIC5.78□□□□□ -1.48
RTP1P59025 RNU6-430P-201ENST00000517078 107 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP1P59025 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.78□□□□□ -1.48
RTP1P59025 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.78□□□□□ -1.48
RTP1P59025 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP1P59025 MIR3667-201ENST00000581025 74 ntBASIC5.78□□□□□ -1.48
RTP1P59025 UBE2V2P2-201ENST00000587677 504 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.78□□□□□ -1.48
RTP1P59025 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RTP1P59025 AC011626.1-201ENST00000604710 562 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.78□□□□□ -1.48
RTP1P59025 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.78□□□□□ -1.48
RTP1P59025 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 AL139089.1-201ENST00000620372 975 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC138965.3-201ENST00000623875 498 ntBASIC5.78□□□□□ -1.48
RTP1P59025 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RTP1P59025 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.78□□□□□ -1.48
RTP1P59025 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
RTP1P59025 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 RNU6-723P-201ENST00000383973 107 ntBASIC5.77□□□□□ -1.49
RTP1P59025 MIR1303-201ENST00000408625 86 ntBASIC5.77□□□□□ -1.49
RTP1P59025 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.77□□□□□ -1.49
RTP1P59025 AC069213.2-201ENST00000420238 366 ntBASIC5.77□□□□□ -1.49
RTP1P59025 LINC00993-201ENST00000420453 540 ntBASIC5.77□□□□□ -1.49
RTP1P59025 AL356583.2-201ENST00000426536 280 ntBASIC5.77□□□□□ -1.49
RTP1P59025 ELOCP14-201ENST00000428070 331 ntBASIC5.77□□□□□ -1.49
RTP1P59025 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
RTP1P59025 ELOCP7-201ENST00000439968 331 ntBASIC5.77□□□□□ -1.49
RTP1P59025 RPS4XP4-201ENST00000443195 763 ntBASIC5.77□□□□□ -1.49
RTP1P59025 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.77□□□□□ -1.49
RTP1P59025 AC019235.1-201ENST00000503847 207 ntBASIC5.77□□□□□ -1.49
RTP1P59025 SUMO2P4-201ENST00000504193 276 ntBASIC5.77□□□□□ -1.49
RTP1P59025 NDUFB4P2-201ENST00000509515 391 ntBASIC5.77□□□□□ -1.49
RTP1P59025 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.77□□□□□ -1.49
RTP1P59025 MTCO1P35-201ENST00000515270 228 ntBASIC5.77□□□□□ -1.49
RTP1P59025 HMGB1P23-201ENST00000518743 568 ntBASIC5.77□□□□□ -1.49
RTP1P59025 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.77□□□□□ -1.49
RTP1P59025 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.77□□□□□ -1.49
RTP1P59025 AC138832.1-201ENST00000522871 556 ntBASIC5.77□□□□□ -1.49
RTP1P59025 AC109635.6-201ENST00000525487 1113 ntBASIC5.77□□□□□ -1.49
RTP1P59025 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.77□□□□□ -1.49
RTP1P59025 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.77□□□□□ -1.49
RTP1P59025 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.77□□□□□ -1.49
RTP1P59025 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 AL359880.1-201ENST00000621879 266 ntBASIC5.77□□□□□ -1.49
RTP1P59025 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 AC009033.1-201ENST00000624279 431 ntBASIC5.77□□□□□ -1.49
RTP1P59025 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RTP1P59025 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RTP1P59025 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.77□□□□□ -1.49
RTP1P59025 CDR1-202ENST00000625883 1485 ntBASIC5.77□□□□□ -1.49
RTP1P59025 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 OR4K15-201ENST00000305051 1216 ntBASIC5.76□□□□□ -1.49
RTP1P59025 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 RNU6-1090P-201ENST00000364065 94 ntBASIC5.76□□□□□ -1.49
RTP1P59025 OR1L6-202ENST00000373684 1044 ntBASIC5.76□□□□□ -1.49
RTP1P59025 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.76□□□□□ -1.49
RTP1P59025 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RTP1P59025 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RTP1P59025 Y_RNA.535-201ENST00000384612 99 ntBASIC5.76□□□□□ -1.49
RTP1P59025 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms