Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC006989.1-201ENST00000427212 131 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 ELOCP6-201ENST00000429066 328 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AC016712.1-201ENST00000431088 378 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.61□□□□□ -1.83
PKNOX1P55347 NDUFB1P1-201ENST00000435191 180 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 RPS7P5-201ENST00000441482 581 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AC068135.1-201ENST00000446164 246 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.61□□□□□ -1.83
PKNOX1P55347 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 ELOCP12-201ENST00000458706 328 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 OR9M1P-201ENST00000459641 921 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.61□□□□□ -1.83
PKNOX1P55347 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.61□□□□□ -1.83
PKNOX1P55347 TPT1P3-201ENST00000492841 512 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
PKNOX1P55347 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.61□□□□□ -1.83
PKNOX1P55347 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 IGKV2-23-201ENST00000518729 323 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.61□□□□□ -1.83
PKNOX1P55347 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 COX6B1P6-201ENST00000522347 255 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 AC139103.1-201ENST00000534696 1030 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AC007448.1-201ENST00000582714 234 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX1P55347 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX1P55347 NTAN1P1-201ENST00000603150 646 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX1P55347 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 AL391261.4-201ENST00000616012 481 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX1P55347 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
PKNOX1P55347 AC020978.9-201ENST00000624380 1141 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.61□□□□□ -1.83
PKNOX1P55347 ZNF33CP-201ENST00000432492 2030 ntBASIC3.61□□□□□ -1.83
PKNOX1P55347 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX1P55347 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKNOX1P55347 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 AC024341.1-201ENST00000526444 1552 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.6□□□□□ -1.83
PKNOX1P55347 RNU6-650P-201ENST00000365658 111 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 RNU4-27P-201ENST00000410889 139 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 PRELID3BP11-201ENST00000414230 479 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.6□□□□□ -1.83
PKNOX1P55347 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX1P55347 OR8F1P-201ENST00000425243 930 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.6□□□□□ -1.83
PKNOX1P55347 SNORD108-201ENST00000459332 71 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 RPL23AP62-201ENST00000463396 453 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC022034.3-201ENST00000471393 478 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.6□□□□□ -1.83
PKNOX1P55347 RPL21P103-201ENST00000479921 488 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 RN7SKP283-201ENST00000517197 270 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC083923.1-201ENST00000523708 376 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX1P55347 CYCSP30-201ENST00000546447 172 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC104229.1-201ENST00000561364 255 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX1P55347 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
PKNOX1P55347 AL606490.9-201ENST00000603331 271 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AC006338.2-201ENST00000616864 791 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AL163051.2-201ENST00000618976 735 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AL445493.3-201ENST00000619568 477 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AL732372.2-225ENST00000642124 456 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.6□□□□□ -1.83
PKNOX1P55347 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PKNOX1P55347 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.6□□□□□ -1.83
PKNOX1P55347 MTCO1P18-201ENST00000455518 1419 ntBASIC3.6□□□□□ -1.83
PKNOX1P55347 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.59□□□□□ -1.83
PKNOX1P55347 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PKNOX1P55347 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
PKNOX1P55347 ATF1P1-201ENST00000406040 927 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 HNRNPDP2-201ENST00000406475 478 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 MTHFD2P2-201ENST00000407725 247 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 AC009237.5-201ENST00000414271 501 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 FAR2P4-202ENST00000425399 584 ntBASIC3.59□□□□□ -1.83
PKNOX1P55347 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms