Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.46□□□□□ -1.05
HOXD11P31277 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.46□□□□□ -1.05
HOXD11P31277 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
HOXD11P31277 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
HOXD11P31277 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
HOXD11P31277 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HOXD11P31277 Y_RNA.368-201ENST00000365547 113 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
HOXD11P31277 SNORA36C-201ENST00000384289 132 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 RNU6-242P-201ENST00000384359 107 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 SNORA70I-201ENST00000384544 135 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 MIR590-201ENST00000385008 97 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 DDX39BP1-205ENST00000422507 192 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 AL078601.1-201ENST00000444542 271 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXD11P31277 AC010368.1-201ENST00000510160 456 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC8.46□□□□□ -1.06
HOXD11P31277 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC8.46□□□□□ -1.06
HOXD11P31277 RNF185-AS1-201ENST00000526089 353 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXD11P31277 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXD11P31277 GNRHR2P1-201ENST00000555315 631 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 AC011193.2-201ENST00000582638 367 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.46□□□□□ -1.06
HOXD11P31277 SNORA43.4-201ENST00000629559 138 ntBASIC8.46□□□□□ -1.06
HOXD11P31277 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HOXD11P31277 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.46□□□□□ -1.06
HOXD11P31277 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
HOXD11P31277 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC8.46□□□□□ -1.06
HOXD11P31277 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXD11P31277 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXD11P31277 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
HOXD11P31277 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC8.45□□□□□ -1.06
HOXD11P31277 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.45□□□□□ -1.06
HOXD11P31277 ACTR3C-206ENST00000613959 5142 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 RN7SKP15-201ENST00000364742 309 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 Y_RNA.323-201ENST00000365157 109 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 RNU6-1080P-201ENST00000383982 107 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 RNU6-279P-201ENST00000391297 101 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 AC005042.1-201ENST00000393397 800 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 RNA5SP265-201ENST00000411023 111 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 AC243964.1-201ENST00000441814 261 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 PPIAP32-201ENST00000449940 472 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 AC107297.1-201ENST00000459991 176 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 AC114300.1-201ENST00000502347 280 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 AC106774.2-201ENST00000510266 406 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 RNA5SP473-201ENST00000516402 125 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 EIF4EBP1P1-201ENST00000557776 341 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.45□□□□□ -1.06
HOXD11P31277 MIR6778-201ENST00000617912 73 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 MESTIT1_1.1-201ENST00000618871 140 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 AL121594.6-201ENST00000633440 261 ntBASIC8.45□□□□□ -1.06
HOXD11P31277 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
HOXD11P31277 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXD11P31277 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXD11P31277 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
HOXD11P31277 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXD11P31277 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXD11P31277 ADAM24P-201ENST00000398655 2101 ntBASIC8.44□□□□□ -1.06
HOXD11P31277 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXD11P31277 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms