Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 REREP1Y-201ENST00000422655 198 ntBASIC5.34□□□□□ -1.55
CFTRP13569 HSPE1P16-201ENST00000426640 348 ntBASIC5.34□□□□□ -1.55
CFTRP13569 REREP2Y-201ENST00000439103 200 ntBASIC5.34□□□□□ -1.55
CFTRP13569 HMGB1P3-201ENST00000502802 616 ntBASIC5.34□□□□□ -1.55
CFTRP13569 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.34□□□□□ -1.55
CFTRP13569 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.34□□□□□ -1.55
CFTRP13569 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.34□□□□□ -1.55
CFTRP13569 RPL23AP92-201ENST00000603609 255 ntBASIC5.34□□□□□ -1.55
CFTRP13569 AC136601.2-201ENST00000604356 474 ntBASIC5.34□□□□□ -1.55
CFTRP13569 AC015813.4-201ENST00000610469 179 ntBASIC5.34□□□□□ -1.55
CFTRP13569 AL359535.1-201ENST00000612100 1087 ntBASIC5.34□□□□□ -1.55
CFTRP13569 AC079298.2-201ENST00000623885 459 ntBASIC5.34□□□□□ -1.55
CFTRP13569 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CFTRP13569 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.34□□□□□ -1.55
CFTRP13569 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CFTRP13569 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CFTRP13569 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CFTRP13569 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.34□□□□□ -1.55
CFTRP13569 CR381670.1-201ENST00000624291 1693 ntBASIC5.34□□□□□ -1.56
CFTRP13569 AC018555.1-201ENST00000567548 1980 ntBASIC5.33□□□□□ -1.56
CFTRP13569 AC097634.1-201ENST00000604491 2467 ntBASIC5.33□□□□□ -1.56
CFTRP13569 MIR1261-201ENST00000408659 82 ntBASIC5.33□□□□□ -1.56
CFTRP13569 BTF3P9-201ENST00000418784 283 ntBASIC5.33□□□□□ -1.56
CFTRP13569 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.33□□□□□ -1.56
CFTRP13569 Z93242.1-201ENST00000427102 353 ntBASIC5.33□□□□□ -1.56
CFTRP13569 RPL12P18-201ENST00000437175 325 ntBASIC5.33□□□□□ -1.56
CFTRP13569 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.33□□□□□ -1.56
CFTRP13569 TRBV8-2-201ENST00000475637 270 ntBASIC5.33□□□□□ -1.56
CFTRP13569 AC091544.4-201ENST00000555268 342 ntBASIC5.33□□□□□ -1.56
CFTRP13569 HMGB1P6-201ENST00000569046 646 ntBASIC5.33□□□□□ -1.56
CFTRP13569 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.33□□□□□ -1.56
CFTRP13569 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.33□□□□□ -1.56
CFTRP13569 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CFTRP13569 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CFTRP13569 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CFTRP13569 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CFTRP13569 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.33□□□□□ -1.56
CFTRP13569 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CFTRP13569 SNORA18.3-201ENST00000384122 132 ntBASIC5.32□□□□□ -1.56
CFTRP13569 AL356968.1-201ENST00000416622 474 ntBASIC5.32□□□□□ -1.56
CFTRP13569 RPL7P36-201ENST00000444633 681 ntBASIC5.32□□□□□ -1.56
CFTRP13569 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.32□□□□□ -1.56
CFTRP13569 AC112492.1-201ENST00000449607 712 ntBASIC5.32□□□□□ -1.56
CFTRP13569 SCARNA20.6-201ENST00000517251 106 ntBASIC5.32□□□□□ -1.56
CFTRP13569 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.32□□□□□ -1.56
CFTRP13569 AC018552.3-201ENST00000567416 561 ntBASIC5.32□□□□□ -1.56
CFTRP13569 AC067852.4-201ENST00000590314 478 ntBASIC5.32□□□□□ -1.56
CFTRP13569 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.32□□□□□ -1.56
CFTRP13569 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CFTRP13569 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.32□□□□□ -1.56
CFTRP13569 RNA5SP39-201ENST00000411245 120 ntBASIC5.32□□□□□ -1.56
CFTRP13569 NANOGP6-201ENST00000429190 847 ntBASIC5.32□□□□□ -1.56
CFTRP13569 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.32□□□□□ -1.56
CFTRP13569 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.32□□□□□ -1.56
CFTRP13569 CYCSP39-201ENST00000565821 309 ntBASIC5.32□□□□□ -1.56
CFTRP13569 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.32□□□□□ -1.56
CFTRP13569 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CFTRP13569 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CFTRP13569 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CFTRP13569 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.31□□□□□ -1.56
CFTRP13569 MIR22-201ENST00000362190 85 ntBASIC5.31□□□□□ -1.56
CFTRP13569 RPL7P25-201ENST00000404151 721 ntBASIC5.31□□□□□ -1.56
CFTRP13569 AC083906.5-201ENST00000503722 328 ntBASIC5.31□□□□□ -1.56
CFTRP13569 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.31□□□□□ -1.56
CFTRP13569 SETP12-201ENST00000514068 805 ntBASIC5.31□□□□□ -1.56
CFTRP13569 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.31□□□□□ -1.56
CFTRP13569 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.31□□□□□ -1.56
CFTRP13569 AC063952.1-203ENST00000634410 658 ntBASIC5.31□□□□□ -1.56
CFTRP13569 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CFTRP13569 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CFTRP13569 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFTRP13569 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CFTRP13569 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFTRP13569 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFTRP13569 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
CFTRP13569 OR1S2-201ENST00000302592 978 ntBASIC5.3□□□□□ -1.56
CFTRP13569 AC002075.2-201ENST00000425207 252 ntBASIC5.3□□□□□ -1.56
CFTRP13569 KATNBL1P2-201ENST00000433311 835 ntBASIC5.3□□□□□ -1.56
CFTRP13569 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFTRP13569 AC099560.2-201ENST00000457554 255 ntBASIC5.3□□□□□ -1.56
CFTRP13569 AC126389.1-201ENST00000477436 290 ntBASIC5.3□□□□□ -1.56
CFTRP13569 RPL7P47-201ENST00000497299 556 ntBASIC5.3□□□□□ -1.56
CFTRP13569 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.3□□□□□ -1.56
CFTRP13569 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.3□□□□□ -1.56
CFTRP13569 AC079600.2-201ENST00000550076 130 ntBASIC5.3□□□□□ -1.56
CFTRP13569 AC011270.1-201ENST00000558606 583 ntBASIC5.3□□□□□ -1.56
CFTRP13569 AL360157.1-201ENST00000565962 87 ntBASIC5.3□□□□□ -1.56
CFTRP13569 AL583832.1-201ENST00000603227 784 ntBASIC5.3□□□□□ -1.56
CFTRP13569 IGHVIII-44-202ENST00000636235 289 ntBASIC5.3□□□□□ -1.56
CFTRP13569 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.3□□□□□ -1.56
CFTRP13569 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFTRP13569 AC087190.4-201ENST00000574616 8334 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms