Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.59
COL3A1P02461 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.15□□□□□ -1.59
COL3A1P02461 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 AC027514.1-201ENST00000588561 1603 ntBASIC5.15□□□□□ -1.59
COL3A1P02461 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 Z82217.1-201ENST00000625157 8149 ntBASIC5.15□□□□□ -1.59
COL3A1P02461 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.15□□□□□ -1.59
COL3A1P02461 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL3A1P02461 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.14□□□□□ -1.59
COL3A1P02461 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.14□□□□□ -1.59
COL3A1P02461 Y_RNA.77-201ENST00000362962 107 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 MIR30B-201ENST00000384850 88 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 SNORA11.1-201ENST00000408133 129 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL3A1P02461 RN7SKP159-201ENST00000410657 292 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 RPL7AP73-201ENST00000413490 353 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.14□□□□□ -1.59
COL3A1P02461 MTND4LP21-201ENST00000415303 295 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AL158050.1-201ENST00000416077 457 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.14□□□□□ -1.59
COL3A1P02461 MTATP6P23-201ENST00000440153 476 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.14□□□□□ -1.59
COL3A1P02461 UBDP1-202ENST00000457888 382 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 PCNAP1-201ENST00000505363 709 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AC026782.2-201ENST00000510845 636 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.14□□□□□ -1.59
COL3A1P02461 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.14□□□□□ -1.59
COL3A1P02461 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.14□□□□□ -1.59
COL3A1P02461 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 SETP1-201ENST00000556014 845 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.14□□□□□ -1.59
COL3A1P02461 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.14□□□□□ -1.59
COL3A1P02461 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.14□□□□□ -1.59
COL3A1P02461 OR7A8P-201ENST00000595427 913 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.14□□□□□ -1.59
COL3A1P02461 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 AC013468.1-201ENST00000608680 598 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AC103591.3-201ENST00000608684 209 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AP000254.1-201ENST00000609934 520 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AP000255.1-201ENST00000610276 676 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 PART1_2.1-201ENST00000612397 250 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 AL596275.2-204ENST00000641628 552 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AL596275.2-206ENST00000641957 626 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.14□□□□□ -1.59
COL3A1P02461 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL3A1P02461 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
COL3A1P02461 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.14□□□□□ -1.59
COL3A1P02461 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 AC011503.2-201ENST00000594230 1500 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 AL356274.2-201ENST00000624379 3752 ntBASIC5.14□□□□□ -1.59
COL3A1P02461 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL3A1P02461 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL3A1P02461 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL3A1P02461 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL3A1P02461 MIR670-201ENST00000390142 98 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 MTND4P20-201ENST00000424125 869 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 RPL7P2-201ENST00000427639 268 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC093422.3-201ENST00000428506 305 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 NPM1P34-201ENST00000428821 893 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 RPS7P2-201ENST00000435134 607 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 MTATP6P13-201ENST00000438531 667 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AL445567.1-201ENST00000439121 144 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC104306.1-201ENST00000449702 371 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 RPS4XP12-201ENST00000461747 709 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AL133162.1-201ENST00000463228 453 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL3A1P02461 RN7SL132P-201ENST00000478131 296 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 OR5H3P-201ENST00000502817 919 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 RNA5SP154-201ENST00000516193 111 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 RNU6-1178P-201ENST00000516674 107 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC060788.1-201ENST00000521318 469 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 MTND2P26-201ENST00000528255 1029 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.13□□□□□ -1.59
COL3A1P02461 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC005255.1-201ENST00000593748 216 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AC008638.3-201ENST00000603341 463 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 AL049634.3-201ENST00000604968 457 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.13□□□□□ -1.59
COL3A1P02461 AC092106.3-201ENST00000611308 722 ntBASIC5.13□□□□□ -1.59
COL3A1P02461 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms