Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 IPO5P1-202ENST00000600039 287 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AL137849.1-201ENST00000604767 169 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC021851.1-201ENST00000608537 1082 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AL359535.1-201ENST00000612100 1087 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 MIR6864-201ENST00000617935 70 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC018926.3-201ENST00000618841 406 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC093908.1-201ENST00000623125 8092 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 MTCO1P4-201ENST00000520516 1409 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RNA5SP443-201ENST00000363083 132 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RNU6-609P-201ENST00000365459 107 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SKINT1L-201ENST00000401057 817 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SNORA11C-201ENST00000408532 129 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 BX664727.1-201ENST00000416024 466 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 OSTCP5-201ENST00000425293 453 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 OR4F13P-201ENST00000428478 931 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 YWHAZP8-201ENST00000436935 731 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 CEACAMP9-201ENST00000442990 513 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC005002.1-201ENST00000447458 540 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SBDSP1-204ENST00000453858 737 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 CEACAMP4-201ENST00000457676 421 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 snoU13.7-201ENST00000459220 104 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RPS27P29-201ENST00000463110 252 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RPL32P14-201ENST00000463196 378 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RPS20P21-201ENST00000466859 343 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC011276.1-201ENST00000469688 323 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AP002884.2-201ENST00000471647 395 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC084198.1-201ENST00000477747 402 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SETP6-201ENST00000479329 568 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RNA5SP519-201ENST00000516480 119 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RNU6-334P-201ENST00000517072 102 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AP003717.3-201ENST00000544832 1180 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 ARF4P1-201ENST00000605447 541 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC011816.2-201ENST00000607089 556 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AL158211.2-201ENST00000607282 395 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC103710.3-201ENST00000608157 948 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AC138393.1-206ENST00000540997 1886 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 AL158163.1-201ENST00000603915 1649 ntBASIC2.86□□□□□ -1.95
HLA-DQA1P01909 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1P01909 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL513302.2-201ENST00000562313 1842 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 OR4K17-201ENST00000315543 1032 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms