Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC016911.1-201ENST00000613297 452 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.51□□□□□ -1.85
SEMA3DO95025 AL732618.1-201ENST00000623251 301 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC016717.3-201ENST00000624730 554 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 OR6C71P-202ENST00000641886 1107 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AL732372.2-225ENST00000642124 456 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.51□□□□□ -1.85
SEMA3DO95025 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.5□□□□□ -1.85
SEMA3DO95025 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.5□□□□□ -1.85
SEMA3DO95025 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.5□□□□□ -1.85
SEMA3DO95025 NMD3P1-201ENST00000439704 1488 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SEMA3DO95025 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.5□□□□□ -1.85
SEMA3DO95025 RNU6-283P-201ENST00000364788 107 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 HMGB1P10-201ENST00000395823 563 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 CCNB2P1-201ENST00000399411 1150 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AL391417.1-201ENST00000404100 426 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.5□□□□□ -1.85
SEMA3DO95025 RN7SKP285-201ENST00000410137 318 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AL445528.1-201ENST00000426330 420 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC091390.1-201ENST00000433904 331 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 RPS29P31-201ENST00000446147 164 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC010655.1-201ENST00000449336 292 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.5□□□□□ -1.85
SEMA3DO95025 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.5□□□□□ -1.85
SEMA3DO95025 HMGB1P3-201ENST00000502802 616 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 PRELID3BP5-201ENST00000508612 460 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC002456.2-201ENST00000509356 380 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC093770.1-201ENST00000511559 571 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC026402.1-201ENST00000513642 170 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC093853.1-201ENST00000515689 483 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 RNU6-889P-201ENST00000517189 103 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC067805.1-201ENST00000559344 470 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AC099676.1-201ENST00000608886 657 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 MIR6798-201ENST00000612887 67 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC068831.8-201ENST00000620171 435 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 AC116563.2-201ENST00000624751 535 ntBASIC3.5□□□□□ -1.85
SEMA3DO95025 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.5□□□□□ -1.85
SEMA3DO95025 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.5□□□□□ -1.85
SEMA3DO95025 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SEMA3DO95025 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
SEMA3DO95025 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 ZNF542P-204ENST00000482727 1305 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SEMA3DO95025 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SEMA3DO95025 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SEMA3DO95025 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEMA3DO95025 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.49□□□□□ -1.85
SEMA3DO95025 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 MIR591-201ENST00000385290 95 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.49□□□□□ -1.85
SEMA3DO95025 SNORA57.3-201ENST00000411095 141 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 RPS29P7-201ENST00000439662 171 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 MTCYBP21-201ENST00000443300 1113 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC023512.1-201ENST00000444513 499 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.49□□□□□ -1.85
SEMA3DO95025 GAPDHP36-201ENST00000480688 918 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC090543.1-201ENST00000492168 485 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC078918.1-201ENST00000498515 228 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 NPM1P41-201ENST00000512920 831 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.49□□□□□ -1.85
SEMA3DO95025 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC008011.1-201ENST00000545989 227 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.49□□□□□ -1.85
SEMA3DO95025 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 TRAV15-201ENST00000556680 249 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AL845331.3-202ENST00000562856 261 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.49□□□□□ -1.85
SEMA3DO95025 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.49□□□□□ -1.85
SEMA3DO95025 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.49□□□□□ -1.85
SEMA3DO95025 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.49□□□□□ -1.85
SEMA3DO95025 AC005229.3-201ENST00000603438 323 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC090525.3-201ENST00000605601 189 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 BX322635.1-201ENST00000605804 496 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC055764.2-201ENST00000610089 670 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 AC009032.1-201ENST00000617574 431 ntBASIC3.49□□□□□ -1.85
SEMA3DO95025 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.49□□□□□ -1.85
SEMA3DO95025 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.49□□□□□ -1.85
SEMA3DO95025 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SEMA3DO95025 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SEMA3DO95025 AC006042.3-201ENST00000454684 1469 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms