Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 Y_RNA.110-201ENST00000363220 99 ntBASIC3.66□□□□□ -1.82
HCN1O60741 RNU1-85P-201ENST00000364127 164 ntBASIC3.66□□□□□ -1.82
HCN1O60741 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 MIR134-201ENST00000385258 73 ntBASIC3.66□□□□□ -1.82
HCN1O60741 RN7SKP202-201ENST00000410439 330 ntBASIC3.66□□□□□ -1.82
HCN1O60741 RNU4-6P-201ENST00000410804 122 ntBASIC3.66□□□□□ -1.82
HCN1O60741 HMGB3P31-201ENST00000413333 595 ntBASIC3.66□□□□□ -1.82
HCN1O60741 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 AL158050.1-201ENST00000416077 457 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC234782.4-201ENST00000417646 1048 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 RPL37P3-201ENST00000456825 293 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC091959.2-201ENST00000477363 321 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC092451.1-201ENST00000480211 153 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AL035404.1-201ENST00000497982 568 ntBASIC3.66□□□□□ -1.82
HCN1O60741 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 AC027338.1-201ENST00000514840 825 ntBASIC3.66□□□□□ -1.82
HCN1O60741 RN7SKP234-201ENST00000517173 224 ntBASIC3.66□□□□□ -1.82
HCN1O60741 HMGB1P23-201ENST00000518743 568 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC008802.1-201ENST00000519121 791 ntBASIC3.66□□□□□ -1.82
HCN1O60741 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 MED28P5-201ENST00000528254 438 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN1O60741 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN1O60741 AP003049.1-201ENST00000529418 457 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
HCN1O60741 AC104229.1-201ENST00000561364 255 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.66□□□□□ -1.82
HCN1O60741 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN1O60741 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN1O60741 AC005776.1-201ENST00000603164 290 ntBASIC3.66□□□□□ -1.82
HCN1O60741 OR2BH1P-201ENST00000608850 864 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC006946.3-201ENST00000609791 756 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC121761.2-201ENST00000617300 689 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC243756.2-201ENST00000618406 463 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AL161637.1-201ENST00000622380 412 ntBASIC3.66□□□□□ -1.82
HCN1O60741 AC097372.4-201ENST00000625025 466 ntBASIC3.66□□□□□ -1.82
HCN1O60741 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN1O60741 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN1O60741 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN1O60741 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HCN1O60741 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
HCN1O60741 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.65□□□□□ -1.82
HCN1O60741 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 RNU6-356P-201ENST00000384140 107 ntBASIC3.65□□□□□ -1.83
HCN1O60741 RPL32P23-201ENST00000397237 405 ntBASIC3.65□□□□□ -1.83
HCN1O60741 ATP5F1P6-201ENST00000402768 767 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AL445183.3-201ENST00000414168 502 ntBASIC3.65□□□□□ -1.83
HCN1O60741 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HCN1O60741 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.65□□□□□ -1.83
HCN1O60741 KCTD9P3-201ENST00000434597 1169 ntBASIC3.65□□□□□ -1.83
HCN1O60741 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.65□□□□□ -1.83
HCN1O60741 RPS7P5-201ENST00000441482 581 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.65□□□□□ -1.83
HCN1O60741 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
HCN1O60741 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 TRBV8-2-201ENST00000475637 270 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN1O60741 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.65□□□□□ -1.83
HCN1O60741 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN1O60741 SLC25A15P5-201ENST00000508033 253 ntBASIC3.65□□□□□ -1.83
HCN1O60741 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 AC026726.1-201ENST00000512859 601 ntBASIC3.65□□□□□ -1.83
HCN1O60741 NPM1P41-201ENST00000512920 831 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.65□□□□□ -1.83
HCN1O60741 MTCO1P49-201ENST00000523429 802 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN1O60741 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 AC090751.1-201ENST00000566966 267 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AC120057.2-201ENST00000571520 271 ntBASIC3.65□□□□□ -1.83
HCN1O60741 EIF1P6-201ENST00000600054 334 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 AL592436.1-201ENST00000605135 558 ntBASIC3.65□□□□□ -1.83
HCN1O60741 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 MIR6868-201ENST00000611215 58 ntBASIC3.65□□□□□ -1.83
HCN1O60741 RMST_10.1-201ENST00000616309 154 ntBASIC3.65□□□□□ -1.83
HCN1O60741 AC124312.6-202ENST00000623624 418 ntBASIC3.65□□□□□ -1.83
HCN1O60741 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN1O60741 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN1O60741 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN1O60741 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN1O60741 UBE3AP2-201ENST00000429033 2259 ntBASIC3.64□□□□□ -1.83
HCN1O60741 MTCO1P18-201ENST00000455518 1419 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms