Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PROM1O43490 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PROM1O43490 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PROM1O43490 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
PROM1O43490 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PROM1O43490 OR5BR1P-201ENST00000524992 1330 ntBASIC4.79□□□□□ -1.64
PROM1O43490 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 RNA5SP88-201ENST00000365560 109 ntBASIC4.79□□□□□ -1.64
PROM1O43490 RNU1-106P-201ENST00000384382 164 ntBASIC4.79□□□□□ -1.64
PROM1O43490 OR6C69P-201ENST00000394268 893 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AL109941.1-201ENST00000401925 229 ntBASIC4.79□□□□□ -1.64
PROM1O43490 ZNF603P-201ENST00000405613 487 ntBASIC4.79□□□□□ -1.64
PROM1O43490 BOLA3P4-201ENST00000418151 400 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 FNDC3CP-201ENST00000420795 1155 ntBASIC4.79□□□□□ -1.64
PROM1O43490 EIF1P1-201ENST00000421436 341 ntBASIC4.79□□□□□ -1.64
PROM1O43490 DDX39BP1-205ENST00000422507 192 ntBASIC4.79□□□□□ -1.64
PROM1O43490 OR2AH1P-201ENST00000425717 928 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC010975.2-201ENST00000427781 588 ntBASIC4.79□□□□□ -1.64
PROM1O43490 PPIAP13-201ENST00000434706 478 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AL031663.1-201ENST00000437445 219 ntBASIC4.79□□□□□ -1.64
PROM1O43490 MTND2P20-201ENST00000440805 661 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.79□□□□□ -1.64
PROM1O43490 AL031584.1-201ENST00000447169 754 ntBASIC4.79□□□□□ -1.64
PROM1O43490 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.79□□□□□ -1.64
PROM1O43490 AC109462.1-201ENST00000491087 368 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.79□□□□□ -1.64
PROM1O43490 RPL37P25-201ENST00000507308 276 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 OR51K1P-201ENST00000510214 950 ntBASIC4.79□□□□□ -1.64
PROM1O43490 RNU6-1178P-201ENST00000516674 107 ntBASIC4.79□□□□□ -1.64
PROM1O43490 RN7SKP283-201ENST00000517197 270 ntBASIC4.79□□□□□ -1.64
PROM1O43490 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC239860.2-201ENST00000525886 270 ntBASIC4.79□□□□□ -1.64
PROM1O43490 PDCD5P1-201ENST00000543528 309 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.79□□□□□ -1.64
PROM1O43490 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.79□□□□□ -1.64
PROM1O43490 AGGF1P8-201ENST00000562979 1000 ntBASIC4.79□□□□□ -1.64
PROM1O43490 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.79□□□□□ -1.64
PROM1O43490 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.79□□□□□ -1.64
PROM1O43490 MTCO3P24-201ENST00000572729 782 ntBASIC4.79□□□□□ -1.64
PROM1O43490 MIR548AB-201ENST00000584917 84 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.79□□□□□ -1.64
PROM1O43490 AC067959.1-201ENST00000604334 379 ntBASIC4.79□□□□□ -1.64
PROM1O43490 TAS2R6P-201ENST00000605022 826 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.79□□□□□ -1.64
PROM1O43490 AL355816.1-201ENST00000607951 118 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC092650.2-201ENST00000619984 902 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC095031.1-201ENST00000623685 672 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AP000648.2-201ENST00000624182 404 ntBASIC4.79□□□□□ -1.64
PROM1O43490 AC116563.2-201ENST00000624751 535 ntBASIC4.79□□□□□ -1.64
PROM1O43490 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.79□□□□□ -1.64
PROM1O43490 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.79□□□□□ -1.64
PROM1O43490 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PROM1O43490 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.78□□□□□ -1.64
PROM1O43490 AL049555.1-201ENST00000562834 1933 ntBASIC4.78□□□□□ -1.64
PROM1O43490 THAP12P4-201ENST00000528321 2266 ntBASIC4.78□□□□□ -1.64
PROM1O43490 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PROM1O43490 SNURFL-201ENST00000309296 343 ntBASIC4.78□□□□□ -1.64
PROM1O43490 RNU6-501P-201ENST00000364072 100 ntBASIC4.78□□□□□ -1.64
PROM1O43490 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
PROM1O43490 SNORA51.12-201ENST00000384448 134 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AL139098.1-201ENST00000407291 389 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AL807761.1-201ENST00000417622 171 ntBASIC4.78□□□□□ -1.64
PROM1O43490 RPL30P16-201ENST00000419341 429 ntBASIC4.78□□□□□ -1.64
PROM1O43490 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.78□□□□□ -1.64
PROM1O43490 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.78□□□□□ -1.64
PROM1O43490 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.78□□□□□ -1.64
PROM1O43490 AL831737.1-201ENST00000441288 271 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AL592447.1-201ENST00000447592 540 ntBASIC4.78□□□□□ -1.64
PROM1O43490 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PROM1O43490 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.78□□□□□ -1.64
PROM1O43490 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 RPL23AP71-201ENST00000470966 469 ntBASIC4.78□□□□□ -1.64
PROM1O43490 OR52A4P-201ENST00000472867 958 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC010683.1-201ENST00000473673 378 ntBASIC4.78□□□□□ -1.64
PROM1O43490 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.78□□□□□ -1.64
PROM1O43490 NIP7P2-201ENST00000485801 544 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC007686.1-201ENST00000488511 463 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.78□□□□□ -1.64
PROM1O43490 AC138853.1-201ENST00000503549 823 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms