Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 MTCO1P23-201ENST00000415223 1526 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
PHGDHO43175 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.81□□□□□ -1.64
PHGDHO43175 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.81□□□□□ -1.64
PHGDHO43175 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.81□□□□□ -1.64
PHGDHO43175 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PHGDHO43175 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 RNU5F-7P-201ENST00000363696 115 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RNU6-501P-201ENST00000364072 100 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 DHFRP6-201ENST00000401776 268 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RN7SKP229-201ENST00000410465 302 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RN7SKP142-201ENST00000411236 328 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 HMGB1P11-201ENST00000413899 637 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RPL23AP74-201ENST00000437246 471 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 SNRPEP7-201ENST00000438350 220 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.81□□□□□ -1.64
PHGDHO43175 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 CYCSP34-201ENST00000458172 304 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.81□□□□□ -1.64
PHGDHO43175 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.81□□□□□ -1.64
PHGDHO43175 AC087385.1-201ENST00000475062 312 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RN7SL319P-201ENST00000480656 221 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RN7SL97P-201ENST00000486780 299 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 RN7SL30P-201ENST00000488416 306 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.81□□□□□ -1.64
PHGDHO43175 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 AL671862.1-201ENST00000515851 349 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 SCARNA21.2-201ENST00000516600 166 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.81□□□□□ -1.64
PHGDHO43175 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PHGDHO43175 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
PHGDHO43175 AC068446.3-201ENST00000555285 382 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.81□□□□□ -1.64
PHGDHO43175 AC093249.4-201ENST00000564755 259 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.81□□□□□ -1.64
PHGDHO43175 AC141257.3-201ENST00000572906 215 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 MIR1269B-201ENST00000580405 75 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC119751.7-201ENST00000600494 245 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 SUMO2P15-201ENST00000604285 278 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC128687.1-201ENST00000605304 619 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC093799.2-201ENST00000610062 578 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 MIR6886-201ENST00000619864 61 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.81□□□□□ -1.64
PHGDHO43175 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.81□□□□□ -1.64
PHGDHO43175 AC090582.1-201ENST00000636321 199 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PHGDHO43175 PABPC1P9-201ENST00000426076 1612 ntBASIC4.81□□□□□ -1.64
PHGDHO43175 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PHGDHO43175 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
PHGDHO43175 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
PHGDHO43175 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHGDHO43175 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 RNU1-106P-201ENST00000384382 164 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 AP000580.1-201ENST00000404439 358 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AL355379.1-201ENST00000405542 640 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.8□□□□□ -1.64
PHGDHO43175 RNA5SP345-201ENST00000410646 108 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 GJA6P-201ENST00000415117 1042 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 AL035410.1-201ENST00000427409 427 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC008065.1-201ENST00000428525 348 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AL589823.1-201ENST00000429577 183 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC004938.1-201ENST00000438468 308 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 TRIM60P18-201ENST00000441518 828 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 ARPC3P5-201ENST00000448802 534 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 BX276092.4-201ENST00000452056 248 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.8□□□□□ -1.64
PHGDHO43175 PLGLA-201ENST00000465668 449 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC108751.2-201ENST00000469993 231 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHGDHO43175 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 RN7SL558P-201ENST00000497468 299 ntBASIC4.8□□□□□ -1.64
PHGDHO43175 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.8□□□□□ -1.64
PHGDHO43175 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.8□□□□□ -1.64
PHGDHO43175 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms