Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RPL23AP29-201ENST00000397284 453 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 RPS24P12-201ENST00000402084 394 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 MIR1302-8-201ENST00000408342 128 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 ATG4AP1-201ENST00000416893 538 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC090960.1-201ENST00000421072 306 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXN3O00409 KATNBL1P3-201ENST00000443475 909 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 RPL36AP15-201ENST00000444514 266 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 MTCO3P2-201ENST00000457365 171 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC022790.1-201ENST00000522872 204 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 AL356057.1-201ENST00000533798 831 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXN3O00409 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.94□□□□□ -1.62
FOXN3O00409 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXN3O00409 SULT1C2P1-202ENST00000562418 459 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXN3O00409 UBE2FP2-201ENST00000566646 462 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXN3O00409 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 AC110760.3-201ENST00000598794 467 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC010620.1-201ENST00000601088 1102 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC121247.2-201ENST00000604776 136 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 AF246928.1-201ENST00000623768 87 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AC231657.1-201ENST00000624313 397 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
FOXN3O00409 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 ZNF37BP-203ENST00000452306 1352 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 SNRPEP3-201ENST00000338402 276 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 RN7SKP115-201ENST00000363177 317 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 RNU6-1243P-201ENST00000364028 107 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
FOXN3O00409 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 SKINT1L-201ENST00000401057 817 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 SSXP10-201ENST00000402595 565 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXN3O00409 RNU2-21P-201ENST00000410368 188 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 COX6CP15-201ENST00000426313 211 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 RPL21P91-201ENST00000429231 479 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.93□□□□□ -1.62
FOXN3O00409 MTND5P28-201ENST00000438005 1594 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AL445567.1-201ENST00000439121 144 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 RPL12P3-201ENST00000440080 396 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.93□□□□□ -1.62
FOXN3O00409 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 DDX39BP2-208ENST00000453923 258 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 RPL18AP17-201ENST00000455326 198 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 SYPL1P1-201ENST00000473622 768 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC104763.1-201ENST00000475274 360 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 RPS3AP43-201ENST00000479743 781 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 RPL32P9-201ENST00000487963 407 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 IGLV2-34-201ENST00000490007 283 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.93□□□□□ -1.62
FOXN3O00409 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 XKRY-201ENST00000510392 1100 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXN3O00409 AC007016.1-201ENST00000512110 244 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXN3O00409 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXN3O00409 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXN3O00409 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
FOXN3O00409 PTP4A1P6-201ENST00000531034 478 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 AC125611.1-201ENST00000549563 229 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 PCNPP1-201ENST00000552501 511 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXN3O00409 AC091042.1-201ENST00000579213 173 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 AC112220.3-201ENST00000605502 502 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC068722.2-201ENST00000618734 544 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AC079248.2-201ENST00000623779 326 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 U3.53-201ENST00000628922 216 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXN3O00409 EOGT-210ENST00000615922 1931 ntBASIC4.93□□□□□ -1.62
FOXN3O00409 AL390862.1-201ENST00000635467 1469 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms