Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL009028.1-201ENST00000604895 802 ntBASIC4.3□□□□□ -1.72
CGB1A6NKQ9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 AC008115.3-201ENST00000614874 549 ntBASIC4.3□□□□□ -1.72
CGB1A6NKQ9 FRG1KP-201ENST00000623592 341 ntBASIC4.3□□□□□ -1.72
CGB1A6NKQ9 CU639417.4-201ENST00000623928 207 ntBASIC4.3□□□□□ -1.72
CGB1A6NKQ9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CGB1A6NKQ9 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
CGB1A6NKQ9 LINC00561-201ENST00000565815 2738 ntBASIC4.3□□□□□ -1.72
CGB1A6NKQ9 AC093671.1-201ENST00000624981 2929 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AL139811.1-201ENST00000424779 2299 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC019155.1-201ENST00000382242 574 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 RNU6-692P-201ENST00000384496 107 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 RPL31P1-201ENST00000398116 372 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 RN7SKP247-201ENST00000411094 308 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 EEF1A1P40-201ENST00000412883 573 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 FCF1P2-201ENST00000415284 583 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 USP9YP27-201ENST00000418455 438 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 RPL34P3-201ENST00000421454 338 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AL138785.1-201ENST00000425821 331 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC005033.1-201ENST00000428904 813 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 BMS1P19-201ENST00000433925 393 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC104850.1-201ENST00000435940 476 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 HMGB1P29-201ENST00000505659 499 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 OR5M14P-201ENST00000506803 618 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC022447.3-201ENST00000506865 495 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 HMGB1P28-201ENST00000507778 552 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC114786.4-201ENST00000508771 728 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 MTND6P2-201ENST00000512226 524 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AF131216.2-201ENST00000512316 564 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 SNORA70.11-201ENST00000515987 138 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 SNORA70.13-201ENST00000516116 138 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC027369.5-201ENST00000533838 755 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AK6P1-201ENST00000540219 478 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC010547.6-201ENST00000571789 193 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC005191.1-201ENST00000603950 358 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 PRELID3BP8-201ENST00000604148 295 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC112187.2-201ENST00000604345 283 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 AC131238.1-201ENST00000617135 328 ntBASIC4.29□□□□□ -1.72
CGB1A6NKQ9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms