Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 RNA5SP130-201ENST00000364431 114 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 RNA5SP515-201ENST00000364570 118 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 RNU6-549P-201ENST00000384433 107 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 MIR1193-201ENST00000408109 78 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 RN7SKP263-201ENST00000411194 309 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 NANOGP6-201ENST00000429190 847 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 OR4C10P-201ENST00000434991 931 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 PPIAP3-201ENST00000450588 505 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 snoU13.7-201ENST00000459220 104 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AL672167.3-201ENST00000465951 960 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 FTH1P2-201ENST00000466086 412 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 S100A11P1-201ENST00000477525 312 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 RPS27P23-201ENST00000487608 251 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 HIGD1AP6-201ENST00000521833 279 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 MTND2P26-201ENST00000528255 1029 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AP003066.2-201ENST00000529375 555 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC133794.1-201ENST00000602731 914 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 LLPHP1-201ENST00000603571 367 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC005156.1-201ENST00000613371 573 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC022079.2-201ENST00000619739 566 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AL590396.4-201ENST00000636779 956 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AL773545.4-201ENST00000637262 310 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AL513478.4-201ENST00000641636 310 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 NMD3P1-201ENST00000439704 1488 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 MTND4P8-201ENST00000514997 1362 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 OR11H5P-202ENST00000641612 1325 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 SPRR2C-201ENST00000290702 219 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 RNU6-1176P-201ENST00000390955 107 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ENSAP1-201ENST00000392855 326 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC004987.3-201ENST00000413879 771 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 UBE2V1P9-201ENST00000414760 368 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AL356095.1-201ENST00000417217 199 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 OR5BE1P-201ENST00000425977 939 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 HSFY6P-201ENST00000445573 403 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 OR51B8P-201ENST00000449892 769 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 RPL23AP15-201ENST00000450202 459 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 SNORD108-201ENST00000459332 71 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 RPL37P6-202ENST00000464216 403 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC010735.1-201ENST00000567305 1026 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC126365.2-201ENST00000580630 379 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC008507.2-201ENST00000588402 1176 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms