Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HDAC1P2-201ENST00000453661 1398 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 Y_RNA.288-201ENST00000364854 92 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-146P-201ENST00000384602 108 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-952P-201ENST00000391164 108 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 VDAC1P9-201ENST00000412766 841 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC080125.1-201ENST00000414888 684 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC007283.2-201ENST00000424739 197 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 PRPS1P1-201ENST00000445305 876 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 HSFY6P-201ENST00000445573 403 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC079168.1-201ENST00000458741 345 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 RPL30P11-201ENST00000495304 339 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC083906.1-201ENST00000509298 406 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC002456.2-201ENST00000509356 380 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC004062.1-201ENST00000509926 645 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC093816.1-201ENST00000515076 913 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-941P-201ENST00000516346 108 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 RNA5SP454-201ENST00000517231 127 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC107934.1-201ENST00000522215 217 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AP001029.3-201ENST00000588063 596 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 BNIP3P16-201ENST00000589779 534 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 ATP1B3P1-201ENST00000605365 821 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 AC006157.1-201ENST00000611750 366 ntBASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.34□□□□□ -1.4
CUEDC1Q9NWM3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.34□□□□□ -1.4
CUEDC1Q9NWM3 MFSD8-239ENST00000641590 2479 ntBASIC6.34□□□□□ -1.4
CUEDC1Q9NWM3 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.34□□□□□ -1.4
CUEDC1Q9NWM3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RNU1-85P-201ENST00000364127 164 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RNU4-2-201ENST00000365668 141 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.463-201ENST00000384271 102 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RNU1-46P-201ENST00000384425 164 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 Y_RNA.515-201ENST00000384535 112 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RN7SKP121-201ENST00000410842 305 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AL161722.2-201ENST00000434731 981 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RPS20P21-201ENST00000466859 343 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RPL31P50-201ENST00000471002 296 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AC104563.1-201ENST00000476147 376 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 RPS27P27-201ENST00000498779 255 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 SNORA58-201ENST00000505219 137 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AC079140.5-201ENST00000507882 310 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AC116655.1-201ENST00000508324 901 ntBASIC6.33□□□□□ -1.4
CUEDC1Q9NWM3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms