Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RSL24D1P11-201ENST00000591045 491 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC016877.3-201ENST00000606778 504 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AL513477.2-201ENST00000607858 568 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AP001596.2-201ENST00000608410 312 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC005609.4-201ENST00000625071 447 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 METTL21EP-201ENST00000298105 713 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 FAM133CP-201ENST00000332869 704 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 RNU6-553P-201ENST00000364047 96 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 RNU5A-2P-201ENST00000384337 116 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 SNORA57.1-201ENST00000391227 145 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL080315.1-201ENST00000406055 466 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL590084.1-201ENST00000407885 387 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 C1DP1-201ENST00000426049 402 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 MOB1AP1-201ENST00000430903 535 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 RPS24P1-201ENST00000438550 371 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 MTCYBP42-201ENST00000444653 1130 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 CASP3P1-201ENST00000446037 609 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 BZW1P2-201ENST00000473537 826 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC091167.1-201ENST00000492017 396 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 HPRT1P2-201ENST00000505250 544 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC090695.1-201ENST00000561269 1222 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 MIR1254-2-201ENST00000579553 63 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 VN1R90P-201ENST00000595717 726 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL137072.1-201ENST00000603444 466 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC073648.5-201ENST00000603502 305 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL163642.2-201ENST00000604722 1019 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC010738.1-201ENST00000604970 987 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 COX6CP4-201ENST00000605798 228 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC069234.5-201ENST00000611056 416 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC087241.4-201ENST00000612441 480 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 ZYXP1-201ENST00000617638 118 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC018755.4-201ENST00000619715 454 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC092656.1-203ENST00000624134 423 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AL160394.1-201ENST00000624765 724 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC006065.6-201ENST00000625201 545 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AP000756.2-201ENST00000624168 2567 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC027514.1-201ENST00000588561 1603 ntBASIC4.63□□□□□ -1.67
EBF3Q9H4W6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
EBF3Q9H4W6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC008033.1-201ENST00000216407 1162 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 OR5P1P-201ENST00000299512 925 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 Y_RNA.3-201ENST00000362331 103 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RNU1-87P-201ENST00000363727 170 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RNU6-304P-201ENST00000364855 107 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 MIR142-201ENST00000384835 87 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 MTND4LP20-201ENST00000402379 270 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RAP1BP3-201ENST00000407180 549 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 BTF3P8-201ENST00000414577 526 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 ELOCP17-201ENST00000414751 326 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms