Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MEMO1P5-201ENST00000604810 406 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC091834.1-201ENST00000614543 472 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC011815.3-201ENST00000624194 473 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC087821.2-201ENST00000637086 450 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 LRRC77P-213ENST00000637727 880 ntBASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDK5RAP1Q96SZ6 AC109315.1-201ENST00000584143 1347 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RN7SKP104-201ENST00000362605 328 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RN7SKP95-201ENST00000362860 303 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RNU4-73P-201ENST00000363164 141 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RNU6-549P-201ENST00000384433 107 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 MIR142-201ENST00000384835 87 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC104297.1-201ENST00000393779 870 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 NCSTNP1-201ENST00000406229 144 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RNU6-575P-201ENST00000411326 105 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC068533.2-201ENST00000411872 306 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 COX6B1P1-201ENST00000415962 213 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 CHEK2P3-201ENST00000416118 248 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 C1DP2-201ENST00000418167 426 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC007435.1-201ENST00000421086 415 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 FABP7P1-201ENST00000424004 391 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RPL7P44-201ENST00000424827 742 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 MTCO1P3-201ENST00000429327 192 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 MTND4LP10-201ENST00000435146 291 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RPS25P9-201ENST00000435591 252 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 HMGB1P45-201ENST00000435986 653 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AL512286.1-201ENST00000439244 400 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RPS26P30-201ENST00000443431 335 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AL589765.3-201ENST00000446084 462 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 ARPC3P2-201ENST00000457786 533 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 PNPLA4P1-201ENST00000458328 305 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 HMGN1P12-201ENST00000499125 195 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC105252.1-201ENST00000503089 286 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AL671862.1-201ENST00000515851 349 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC006349.1-201ENST00000555526 235 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 MIR4637-201ENST00000582405 84 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 PRPF19P1-201ENST00000584766 898 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AP005137.2-201ENST00000609238 400 ntBASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDK5RAP1Q96SZ6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 CR383658.2-201ENST00000547576 1525 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 VPS35P1-201ENST00000563400 1518 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 AC073136.1-201ENST00000449426 2884 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 Y_RNA.356-201ENST00000365475 113 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 RNU5A-6P-201ENST00000384136 116 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 RPL31P1-201ENST00000398116 372 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 CYCSP45-201ENST00000402289 315 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 RPL10P10-201ENST00000403509 664 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 FCF1P10-201ENST00000407590 479 ntBASIC5.23□□□□□ -1.57
CDK5RAP1Q96SZ6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms