Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-CQ95604 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.76□□□□□ -1.33
HLA-CQ95604 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 AL034417.4-202ENST00000642135 2236 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AC008627.1-201ENST00000517511 1704 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
HLA-CQ95604 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.75□□□□□ -1.33
HLA-CQ95604 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 RNA5SP110-201ENST00000362638 115 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 RNU6-1127P-201ENST00000384580 107 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 RNU6-550P-201ENST00000391057 101 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 U3.43-201ENST00000410734 213 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AL139095.3-201ENST00000419672 1203 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HLA-CQ95604 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 EZH2P1-201ENST00000431167 291 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AC073910.1-201ENST00000445047 438 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AL133244.1-201ENST00000456007 258 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AC116533.1-201ENST00000459748 321 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 RPL23AP64-201ENST00000469465 435 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 RPS23P3-201ENST00000470993 430 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AC026801.1-201ENST00000497178 464 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 SLC25A15P5-201ENST00000508033 253 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC131281.1-201ENST00000522984 164 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AP005639.1-201ENST00000526939 192 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AC023245.2-201ENST00000530760 2978 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC090115.3-201ENST00000553218 849 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC022404.1-201ENST00000555320 273 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC020910.3-201ENST00000603701 874 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 AC073046.2-201ENST00000604756 527 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 ATP1B3P1-201ENST00000605365 821 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC118658.2-201ENST00000618697 459 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.75□□□□□ -1.33
HLA-CQ95604 AC011592.1-201ENST00000624647 3634 ntBASIC6.75□□□□□ -1.33
HLA-CQ95604 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HLA-CQ95604 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.75□□□□□ -1.33
HLA-CQ95604 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
HLA-CQ95604 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-CQ95604 MIR1252-201ENST00000408861 65 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 RN7SKP281-201ENST00000410472 352 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 RN7SKP216-201ENST00000411050 312 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AL358176.3-201ENST00000420757 454 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 GSTA6P-201ENST00000424144 582 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 RPS27P18-201ENST00000431701 247 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-CQ95604 RPS7P3-201ENST00000443360 580 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-CQ95604 SNORD5.1-201ENST00000458800 75 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AC022493.2-201ENST00000506122 481 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms