Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 RPL23AP62-201ENST00000463396 453 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AC087385.1-201ENST00000475062 312 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AC108729.2-201ENST00000476543 840 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AC025181.1-201ENST00000477507 416 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 RN7SL323P-201ENST00000494712 295 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 TXNP6-201ENST00000510190 310 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AL121766.1-201ENST00000547436 487 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 TRAV15-201ENST00000556680 249 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AC135178.6-201ENST00000605314 398 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 MIR6875-201ENST00000617506 72 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AC058791.1-201ENST00000608412 3198 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC073073.2-201ENST00000609827 2578 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC068538.1-201ENST00000376856 336 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 TAF9BP2-201ENST00000400856 499 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC092832.1-201ENST00000422934 400 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 OR8F1P-201ENST00000425243 930 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 ARL5AP2-201ENST00000444698 533 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 TPT1P12-201ENST00000448968 492 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC099563.1-201ENST00000456086 418 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 FTH1P24-201ENST00000503502 462 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 RN7SKP141-201ENST00000516167 338 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 HIGD1AP5-201ENST00000529959 259 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 POLR2KP1-201ENST00000553226 168 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 TGIF1P1-201ENST00000558095 802 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 PCNAP1-202ENST00000595299 752 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC040174.2-201ENST00000602701 465 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC006254.3-201ENST00000603353 884 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC015849.2-201ENST00000605738 409 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 AC012467.1-201ENST00000607740 256 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 ZYXP1-201ENST00000617638 118 ntBASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC50Q8IVM0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 MFSD8-236ENST00000641509 4050 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 RNU6-252P-201ENST00000363232 107 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 RNU6-213P-201ENST00000384051 104 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AC136624.1-201ENST00000400791 413 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 HMGB1P13-201ENST00000406019 642 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 MTATP6P31-201ENST00000406985 692 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 MIR1303-201ENST00000408625 86 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 RNU6-628P-201ENST00000410675 107 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AC069218.2-201ENST00000411665 344 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 TCEA1P4-201ENST00000415066 844 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 MTND2P15-201ENST00000418575 892 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 PTP4A1P5-201ENST00000420305 455 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AL390879.2-203ENST00000426943 1121 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 RPL7P29-201ENST00000437151 728 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AC069540.1-201ENST00000446320 988 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AC104687.1-201ENST00000485829 412 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 TPT1P3-201ENST00000492841 512 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AL035404.1-201ENST00000497982 568 ntBASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC50Q8IVM0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms