Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LGSNQ5TDP6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LGSNQ5TDP6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AL121657.1-201ENST00000327215 531 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC068538.1-201ENST00000376856 336 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AL590290.1-201ENST00000405336 380 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC004022.2-201ENST00000413824 193 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 RPL30P2-201ENST00000414021 291 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 ETF1P3-201ENST00000430422 1160 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 ELOCP11-201ENST00000436690 332 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 ELOCP16-201ENST00000444494 332 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC010285.3-201ENST00000511668 676 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 MTATP6P2-201ENST00000603319 678 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AL034351.1-201ENST00000605288 668 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 RNU4-89P-201ENST00000607443 133 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 OR2BH1P-201ENST00000608850 864 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AC073569.3-201ENST00000619055 682 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 MAPK10-372ENST00000641954 3413 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 AL592494.2-201ENST00000425455 1548 ntBASIC3.79□□□□□ -1.8
LGSNQ5TDP6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LGSNQ5TDP6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC025125.1-201ENST00000624743 1922 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 MTND4P31-201ENST00000425607 1343 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RNU6-543P-201ENST00000362576 108 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RNA5SP27-201ENST00000363839 119 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RNA5SP424-201ENST00000390988 115 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RPS26P8-201ENST00000393490 348 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 SNORD108-201ENST00000459332 71 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC002456.2-201ENST00000509356 380 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RN7SKP82-201ENST00000516786 223 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 HMGB1P23-201ENST00000518743 568 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 MTND4LP24-201ENST00000572277 291 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 MIR4738-201ENST00000579134 87 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AP003117.2-201ENST00000606010 545 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC112503.2-201ENST00000609005 552 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AP005229.2-201ENST00000609980 697 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC078899.5-201ENST00000612475 178 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 AC132825.7-201ENST00000638744 335 ntBASIC3.78□□□□□ -1.8
LGSNQ5TDP6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
LGSNQ5TDP6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
LGSNQ5TDP6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.81
LGSNQ5TDP6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
LGSNQ5TDP6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LGSNQ5TDP6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LGSNQ5TDP6 DCAF13P1-201ENST00000495256 1330 ntBASIC3.77□□□□□ -1.81
LGSNQ5TDP6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LGSNQ5TDP6 HSPA8P19-201ENST00000505359 1517 ntBASIC3.77□□□□□ -1.81
LGSNQ5TDP6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LGSNQ5TDP6 SNORA70.2-201ENST00000364506 135 ntBASIC3.77□□□□□ -1.81
LGSNQ5TDP6 SNORA70C-201ENST00000384538 135 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms