Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NDUFA5P7-201ENST00000452914 242 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AC233279.1-201ENST00000455300 423 ntBASIC5.36□□□□□ -1.55
YBX1P67809 BTF3P5-201ENST00000457252 467 ntBASIC5.36□□□□□ -1.55
YBX1P67809 SNORD125-201ENST00000459538 96 ntBASIC5.36□□□□□ -1.55
YBX1P67809 RPS26P39-201ENST00000469206 341 ntBASIC5.36□□□□□ -1.55
YBX1P67809 RPL36AP51-201ENST00000487216 318 ntBASIC5.36□□□□□ -1.55
YBX1P67809 IGBP1P4-201ENST00000503202 879 ntBASIC5.36□□□□□ -1.55
YBX1P67809 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 ATP5LP3-201ENST00000514223 304 ntBASIC5.36□□□□□ -1.55
YBX1P67809 RNA5SP362-201ENST00000516048 118 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.36□□□□□ -1.55
YBX1P67809 AC105029.1-201ENST00000520250 669 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AP006245.2-201ENST00000522004 300 ntBASIC5.36□□□□□ -1.55
YBX1P67809 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.36□□□□□ -1.55
YBX1P67809 BRD9P1-201ENST00000529855 560 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.36□□□□□ -1.55
YBX1P67809 AC011611.1-201ENST00000552179 197 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL358913.1-201ENST00000554342 121 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.36□□□□□ -1.55
YBX1P67809 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.36□□□□□ -1.55
YBX1P67809 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.36□□□□□ -1.55
YBX1P67809 MIR6719-201ENST00000622428 87 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL732618.1-201ENST00000623251 301 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AC145207.9-201ENST00000623802 325 ntBASIC5.36□□□□□ -1.55
YBX1P67809 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
YBX1P67809 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
YBX1P67809 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
YBX1P67809 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
YBX1P67809 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.35□□□□□ -1.55
YBX1P67809 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.35□□□□□ -1.55
YBX1P67809 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 RNA5SP234-201ENST00000363916 119 ntBASIC5.35□□□□□ -1.55
YBX1P67809 SNORA74A-201ENST00000364089 198 ntBASIC5.35□□□□□ -1.55
YBX1P67809 RNU6-1322P-201ENST00000364309 107 ntBASIC5.35□□□□□ -1.55
YBX1P67809 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
YBX1P67809 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.35□□□□□ -1.55
YBX1P67809 RN7SKP293-201ENST00000411389 296 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 OR9R1P-201ENST00000412200 877 ntBASIC5.35□□□□□ -1.55
YBX1P67809 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 SDHDP6-201ENST00000414693 480 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.35□□□□□ -1.55
YBX1P67809 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.35□□□□□ -1.55
YBX1P67809 EIF1P3-201ENST00000423841 334 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AL589872.1-201ENST00000426602 288 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.35□□□□□ -1.55
YBX1P67809 AL365400.1-201ENST00000431854 640 ntBASIC5.35□□□□□ -1.55
YBX1P67809 TMEM183AP1-205ENST00000432739 290 ntBASIC5.35□□□□□ -1.55
YBX1P67809 CACYBPP1-201ENST00000438592 684 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 REG1CP-206ENST00000447469 496 ntBASIC5.35□□□□□ -1.55
YBX1P67809 RPS27AP15-201ENST00000447672 466 ntBASIC5.35□□□□□ -1.55
YBX1P67809 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 AC023194.1-201ENST00000493084 308 ntBASIC5.35□□□□□ -1.55
YBX1P67809 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.35□□□□□ -1.55
YBX1P67809 AC026427.2-201ENST00000506228 536 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC006390.1-201ENST00000508068 283 ntBASIC5.35□□□□□ -1.55
YBX1P67809 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.35□□□□□ -1.55
YBX1P67809 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.35□□□□□ -1.55
YBX1P67809 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.35□□□□□ -1.55
YBX1P67809 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
YBX1P67809 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.35□□□□□ -1.55
YBX1P67809 RNU6-445P-201ENST00000516949 107 ntBASIC5.35□□□□□ -1.55
YBX1P67809 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.35□□□□□ -1.55
YBX1P67809 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.35□□□□□ -1.55
YBX1P67809 IGKV2-18-201ENST00000522607 343 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.35□□□□□ -1.55
YBX1P67809 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.35□□□□□ -1.55
YBX1P67809 AC122688.1-201ENST00000541494 223 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.35□□□□□ -1.55
YBX1P67809 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
YBX1P67809 AP005403.1-201ENST00000579720 229 ntBASIC5.35□□□□□ -1.55
YBX1P67809 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.35□□□□□ -1.55
YBX1P67809 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms