Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPS3AP61247 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPS3AP61247 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RPS3AP61247 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.34□□□□□ -1.71
RPS3AP61247 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPS3AP61247 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPS3AP61247 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
RPS3AP61247 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPS3AP61247 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RPS3AP61247 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RPS3AP61247 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 AL136164.3-201ENST00000624429 3978 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 AL359893.1-201ENST00000447628 1580 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC103591.2-201ENST00000265259 766 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 U3.15-201ENST00000365398 212 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 SNORA51.6-201ENST00000384151 125 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 OR8G2P-201ENST00000412796 908 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 RPS24P7-201ENST00000416921 246 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.33□□□□□ -1.72
RPS3AP61247 HMGB3P5-201ENST00000428894 612 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 ATP5F1P1-201ENST00000433775 569 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 CKS1BP5-201ENST00000434172 273 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 KCTD10P1-201ENST00000434203 625 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 RPS17P8-201ENST00000434525 335 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 MTCYBP11-201ENST00000447254 1109 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC108463.1-201ENST00000450258 347 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC010733.1-201ENST00000451515 401 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.33□□□□□ -1.72
RPS3AP61247 RN7SL558P-201ENST00000497468 299 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC079395.1-201ENST00000510981 262 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC005798.1-201ENST00000513715 387 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 HNRNPKP5-201ENST00000515300 253 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 RN7SKP276-201ENST00000516242 268 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 RNU4-60P-201ENST00000517239 135 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.33□□□□□ -1.72
RPS3AP61247 AP001880.2-201ENST00000538233 448 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.33□□□□□ -1.72
RPS3AP61247 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.33□□□□□ -1.72
RPS3AP61247 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC022726.1-201ENST00000587475 207 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC073091.2-201ENST00000603205 907 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC009220.3-201ENST00000604318 586 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC008083.4-201ENST00000615076 444 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC067852.7-201ENST00000623270 535 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 AC006065.5-201ENST00000623427 349 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC092184.1-201ENST00000625042 715 ntBASIC4.33□□□□□ -1.72
RPS3AP61247 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RPS3AP61247 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPS3AP61247 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RPS3AP61247 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
RPS3AP61247 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RPS3AP61247 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPS3AP61247 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPS3AP61247 ZNF734P-201ENST00000419494 1534 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RPS3AP61247 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.32□□□□□ -1.72
RPS3AP61247 ZNF37BP-203ENST00000452306 1352 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 SEPT7P7-201ENST00000420492 1301 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.32□□□□□ -1.72
RPS3AP61247 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RPS3AP61247 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPS3AP61247 Y_RNA.408-201ENST00000383987 102 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 U3.30-201ENST00000391308 210 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 TAF9BP1-201ENST00000396646 746 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 RN7SKP100-201ENST00000411258 284 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
RPS3AP61247 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.32□□□□□ -1.72
RPS3AP61247 LINC00993-201ENST00000420453 540 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 OFD1P18Y-201ENST00000420889 959 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.32□□□□□ -1.72
RPS3AP61247 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.32□□□□□ -1.72
RPS3AP61247 MTND2P20-201ENST00000440805 661 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.32□□□□□ -1.72
RPS3AP61247 SNORD108-201ENST00000459332 71 ntBASIC4.32□□□□□ -1.72
RPS3AP61247 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.32□□□□□ -1.72
RPS3AP61247 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms