Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
MMP3P08254 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
MMP3P08254 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.63□□□□□ -1.67
MMP3P08254 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 AL161631.1-201ENST00000417933 486 ntBASIC4.63□□□□□ -1.67
MMP3P08254 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.63□□□□□ -1.67
MMP3P08254 OR5AW1P-201ENST00000426334 1006 ntBASIC4.63□□□□□ -1.67
MMP3P08254 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.63□□□□□ -1.67
MMP3P08254 AC006011.1-201ENST00000442758 349 ntBASIC4.63□□□□□ -1.67
MMP3P08254 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.63□□□□□ -1.67
MMP3P08254 ABCF2P2-201ENST00000450549 296 ntBASIC4.63□□□□□ -1.67
MMP3P08254 MRPL35P4-201ENST00000453682 566 ntBASIC4.63□□□□□ -1.67
MMP3P08254 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.63□□□□□ -1.67
MMP3P08254 PRDX3P4-201ENST00000470828 747 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AL035404.1-201ENST00000497982 568 ntBASIC4.63□□□□□ -1.67
MMP3P08254 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 AC113347.3-201ENST00000509113 148 ntBASIC4.63□□□□□ -1.67
MMP3P08254 RN7SKP46-201ENST00000515942 234 ntBASIC4.63□□□□□ -1.67
MMP3P08254 RNA5SP143-201ENST00000516936 115 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.63□□□□□ -1.67
MMP3P08254 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 AC023050.2-201ENST00000544968 387 ntBASIC4.63□□□□□ -1.67
MMP3P08254 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.63□□□□□ -1.67
MMP3P08254 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.63□□□□□ -1.67
MMP3P08254 EIF1P6-201ENST00000600054 334 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AL606490.9-201ENST00000603331 271 ntBASIC4.63□□□□□ -1.67
MMP3P08254 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 AL451086.1-201ENST00000605596 223 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.63□□□□□ -1.67
MMP3P08254 MIR7973-1-201ENST00000614683 76 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AC105227.2-201ENST00000615075 605 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AC099669.2-201ENST00000616549 437 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
MMP3P08254 AC112200.1-201ENST00000625015 234 ntBASIC4.63□□□□□ -1.67
MMP3P08254 ATE1-AS1-202ENST00000636460 506 ntBASIC4.63□□□□□ -1.67
MMP3P08254 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.63□□□□□ -1.67
MMP3P08254 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 AC092162.3-201ENST00000624511 1624 ntBASIC4.63□□□□□ -1.67
MMP3P08254 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.63□□□□□ -1.67
MMP3P08254 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
MMP3P08254 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MMP3P08254 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
MMP3P08254 AC107027.3-201ENST00000565095 3473 ntBASIC4.63□□□□□ -1.67
MMP3P08254 AC000123.3-201ENST00000624029 4975 ntBASIC4.63□□□□□ -1.67
MMP3P08254 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.63□□□□□ -1.67
MMP3P08254 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.62□□□□□ -1.67
MMP3P08254 FAM91A3P-201ENST00000456826 2544 ntBASIC4.62□□□□□ -1.67
MMP3P08254 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 RNU6-707P-201ENST00000364647 95 ntBASIC4.62□□□□□ -1.67
MMP3P08254 RNA5SP22-201ENST00000365393 109 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AC119751.3-201ENST00000399720 670 ntBASIC4.62□□□□□ -1.67
MMP3P08254 HSPE1P12-201ENST00000412576 301 ntBASIC4.62□□□□□ -1.67
MMP3P08254 UBTFL3-201ENST00000418934 1024 ntBASIC4.62□□□□□ -1.67
MMP3P08254 RPF2P1-201ENST00000424137 906 ntBASIC4.62□□□□□ -1.67
MMP3P08254 MTND5P25-201ENST00000430499 799 ntBASIC4.62□□□□□ -1.67
MMP3P08254 MRPL42P4-201ENST00000453267 443 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.62□□□□□ -1.67
MMP3P08254 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.62□□□□□ -1.67
MMP3P08254 RPL23AP2-201ENST00000471227 466 ntBASIC4.62□□□□□ -1.67
MMP3P08254 UBTFL6-201ENST00000477929 1024 ntBASIC4.62□□□□□ -1.67
MMP3P08254 BNIP3P41-201ENST00000503774 571 ntBASIC4.62□□□□□ -1.67
MMP3P08254 SNORA3.4-201ENST00000515969 96 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AC124293.1-201ENST00000530034 493 ntBASIC4.62□□□□□ -1.67
MMP3P08254 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
MMP3P08254 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.62□□□□□ -1.67
MMP3P08254 MIR4444-1-201ENST00000581696 74 ntBASIC4.62□□□□□ -1.67
MMP3P08254 MIR4472-2-201ENST00000582069 67 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.62□□□□□ -1.67
MMP3P08254 MIR4444-2-201ENST00000584390 74 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.62□□□□□ -1.67
MMP3P08254 AC013444.2-201ENST00000603317 787 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AL133507.1-201ENST00000605269 557 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AP000676.3-201ENST00000623299 569 ntBASIC4.62□□□□□ -1.67
MMP3P08254 AC109454.4-201ENST00000623411 649 ntBASIC4.62□□□□□ -1.67
MMP3P08254 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
MMP3P08254 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.62□□□□□ -1.67
MMP3P08254 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
MMP3P08254 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 MAPK10-320ENST00000641462 6696 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms