Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC008280.2-201ENST00000455473 307 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RNA5SP246-201ENST00000458909 119 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RN7SL98P-201ENST00000462271 300 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC010401.1-201ENST00000463867 348 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RPL9P32-201ENST00000464118 620 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RPS3AP50-201ENST00000487064 803 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 TXNP6-201ENST00000510190 310 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 PHBP14-201ENST00000512887 367 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RAB9BP1-201ENST00000519581 626 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 OR4C2P-201ENST00000530855 1064 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 PTP4A1P6-201ENST00000531034 478 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC008011.1-201ENST00000545989 227 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC011602.1-201ENST00000546484 331 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 MIR4277-201ENST00000578298 84 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AP001180.3-201ENST00000582221 145 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RN7SL622P-201ENST00000585292 275 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC005255.1-201ENST00000593748 216 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC005191.1-201ENST00000603950 358 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC115621.1-201ENST00000604653 858 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AL592436.1-201ENST00000605135 558 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC026741.1-201ENST00000605892 482 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AP003117.2-201ENST00000606010 545 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC099669.2-201ENST00000616549 437 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC018816.2-201ENST00000621460 353 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC017104.5-201ENST00000637647 639 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 NSRP1P1-201ENST00000444067 1693 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 MTND4P8-201ENST00000514997 1362 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC139713.2-214ENST00000642059 1811 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RNU6-1339P-201ENST00000363574 91 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 PRRC2CP1-201ENST00000404428 159 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC017079.2-201ENST00000416102 485 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 P2RY10P2-201ENST00000416730 913 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 UBE2D3P3-201ENST00000426992 425 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 ARL4AP4-201ENST00000434170 518 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 FABP5P3-201ENST00000437960 408 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RPL12P26-201ENST00000452430 487 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RPS29P33-201ENST00000456717 146 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AP000893.1-201ENST00000474462 794 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC008628.1-201ENST00000508663 265 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC104108.1-201ENST00000509930 412 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC121161.1-201ENST00000510606 652 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RPL7L1P13-201ENST00000511702 739 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 RN7SKP82-201ENST00000516786 223 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 NDUFB9P3-201ENST00000521269 501 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 MTND2P26-201ENST00000528255 1029 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC009643.1-201ENST00000532030 391 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AL136520.1-202ENST00000555494 763 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC090312.2-201ENST00000582687 378 ntBASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1P01909 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms