Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 GNRHR2P1-201ENST00000555315 631 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AP000255.1-201ENST00000610276 676 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AP004607.9-201ENST00000618202 316 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AC006249.1-201ENST00000621223 471 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 MAPK10-372ENST00000641954 3413 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 ZNF90P1-201ENST00000480493 1951 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 AC097504.1-201ENST00000515103 2415 ntBASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APOBEC3BQ9UH17 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 SNORA5A-201ENST00000384111 134 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 MIR93-201ENST00000385024 80 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 RNU6-796P-201ENST00000391086 107 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 RNU4-27P-201ENST00000410889 139 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 RNA5SP306-201ENST00000411087 107 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 RNU4-74P-201ENST00000411280 161 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 YME1L1P1-201ENST00000429435 297 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC005912.1-201ENST00000495392 255 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC025459.1-201ENST00000504072 156 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 RNA5SP164-201ENST00000516533 110 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC093510.2-201ENST00000562820 896 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 MIR3944-201ENST00000581277 108 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL034408.1-202ENST00000636088 415 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AC119674.1-212ENST00000641155 993 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 AL592494.2-201ENST00000425455 1548 ntBASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APOBEC3BQ9UH17 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 SNORD74.4-201ENST00000364129 80 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 MIR199A2-201ENST00000385289 110 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 RNA5SP44-201ENST00000410446 133 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 XKRYP4-201ENST00000414395 483 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AL160175.1-201ENST00000428124 247 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 Z74696.2-201ENST00000436514 498 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 PPIAP17-201ENST00000438507 471 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AL353748.1-201ENST00000440753 474 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 XKRYP5-201ENST00000449659 483 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 RPL9P32-201ENST00000464118 620 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 RPL7L1P8-201ENST00000469911 741 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC092902.1-201ENST00000486999 259 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 UBE2CP3-201ENST00000502715 450 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 MTCO2P9-201ENST00000503214 694 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC108120.2-201ENST00000512973 294 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 RNU6-334P-201ENST00000517072 102 ntBASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC3BQ9UH17 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms