Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CNTN3Q9P232 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CNTN3Q9P232 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
CNTN3Q9P232 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CNTN3Q9P232 AC092162.3-201ENST00000624511 1624 ntBASIC6.21□□□□□ -1.41
CNTN3Q9P232 AC027228.2-201ENST00000567141 2154 ntBASIC6.21□□□□□ -1.41
CNTN3Q9P232 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNTN3Q9P232 RNU5E-1-201ENST00000362477 120 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RNU6-223P-201ENST00000362830 107 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RNU6-1097P-201ENST00000363586 107 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 SNORA20.2-201ENST00000383922 131 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 DHFRP6-201ENST00000401776 268 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RNU6-1068P-201ENST00000410958 103 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RAB28P1-201ENST00000411517 641 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AL133384.1-201ENST00000412744 351 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 OR2AT2P-201ENST00000413438 905 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 PPIAP13-201ENST00000434706 478 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RPL23AP74-201ENST00000437246 471 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RPL5P25-201ENST00000441148 775 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 MRPL50P4-201ENST00000446432 475 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 OR7E116P-201ENST00000448529 957 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 RPL7P42-201ENST00000481005 679 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AP001025.2-201ENST00000490908 477 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AC005912.1-201ENST00000495392 255 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 GAPDHP56-201ENST00000506031 988 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 RNA5SP401-201ENST00000515920 127 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 RNU6-277P-201ENST00000516272 106 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AC078899.1-201ENST00000521432 1185 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AC022861.1-201ENST00000522981 663 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 AC022404.1-201ENST00000555320 273 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNTN3Q9P232 SNORD95-201ENST00000579879 68 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 MIR4505-201ENST00000582238 73 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 BBIP1P1-201ENST00000602999 279 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 AL133255.1-201ENST00000606374 441 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 AC108467.2-201ENST00000617640 1597 ntBASIC6.21□□□□□ -1.42
CNTN3Q9P232 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CNTN3Q9P232 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CNTN3Q9P232 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.21□□□□□ -1.42
CNTN3Q9P232 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 MTND4P27-201ENST00000450813 1354 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AP004607.3-201ENST00000530354 3915 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 RN7SKP186-201ENST00000365371 303 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 RNA5SP30-201ENST00000365552 115 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 RNU6-108P-201ENST00000365558 107 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 RNU6-1158P-201ENST00000391167 107 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL031679.1-201ENST00000400616 525 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL162578.1-201ENST00000406202 378 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL356967.1-201ENST00000406305 431 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC009161.1-201ENST00000417306 376 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC113412.1-201ENST00000425840 504 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC018644.1-201ENST00000429934 551 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 EEF1B2P6-201ENST00000445713 673 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC002381.1-201ENST00000447049 280 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 RPS15AP36-201ENST00000492022 382 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 PCBP2P3-201ENST00000509726 843 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 OR5B19P-201ENST00000531766 928 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC115621.1-201ENST00000604653 858 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC104695.2-201ENST00000605056 775 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 MIR6768-201ENST00000610734 72 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms